Agrobacterium tumefaciens H13-3: AGROH133_06135
Help
Entry
AGROH133_06135 CDS
T01432
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agr03032
]
AGROH133_06135 (gyrA)
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_06135 (gyrA)
Enzymes [BR:
agr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AGROH133_06135 (gyrA)
DNA replication proteins [BR:
agr03032
]
Prokaryotic type
DNA Topoisomerases
AGROH133_06135 (gyrA)
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AGROH133_06135 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADY64405
LinkDB
All DBs
Position
circular:complement(1426466..1429258)
Genome browser
AA seq
930 aa
AA seq
DB search
MTDQSPPGGGKLPPGIEPISIIEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGM
SELGIDWNKKYVKCARVTGDVMGKFHPHGNAAIYDALARMAQDWSLRLPLIDGQGNFGSI
DGDPPAAERYTECRLEKAAHSLLDDLDKETVDFRDNYDGTLHEPVVIPAKFPNLLVNGAG
GIAVGMATNIPPHNLSEVIDGCIALIDNPAIELLELMQIISGPDFPTGALIMGRSGIRSA
YETGRGSVIMRGRATIEPMRGDREQIIITEVPYQVNKATMIEKMAELVKEKRIEGISDLR
DESDRQGYRVVVELKRDANAEVILNQIYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRA
FVSFREDVVSRRTKYLLRKARDRAHVLVGLAISVANIDEVIRVIRHAPDPASAREELMTR
RWPAQDVESLIRLIDDPRHRINEDGTYNLSEEQARAILELRLARLTALGRDEIGDELNKI
GAEISEYLEILSSRLRIMQIVKDELIAIRDEFGTPRRSEIVEGGPDMDDEDLISREDMVV
TVSHLGYIKRVPLTTYRAQRRGGKGRSGMATRDEDFVNRLFVANTHTPVLFFSSRGIVYK
EKVWRLPIGTPQSKGKALINMLPLEPGERITTIMPLPEDETTWETLDVMFSTTRGTVRRN
KLGDFVQVNRNGKIAMKLEEEGDEILSVETCTDQDDVLLTTALGQCIRFPVDDVRVFAGR
NSVGVRGINMADGDRIISMTIVGHVEAEPWERAAYLKRSATERRAAGVDEEDIALVGEEV
AEEGELSEERYQELKAREEFVLTVSEKGYGKRSSSYDFRTSGRGGKGIRATDTSKTTEIG
ELVAAFPVDEGDQIMLVSDGGQLIRVPVNGIRIASRATKGVTIFSTAKDEKVVSVERINE
PEGDEEAENGNGEDVADTLPDTPEAPESEA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaccagagcccccccggcggcggaaaacttccgccaggcattgaaccgatttcc
atcattgaggaaatgcagcggtcctatctcgattacgccatgagcgttatcgtttcccgc
gcgcttcccgatgtccgtgacggtctgaagccggttcatcgccgtattctttacggcatg
tccgaactcggcatcgactggaacaagaaatacgtcaaatgcgcccgcgtcaccggtgac
gtgatgggtaaattccatccgcacggcaatgcggcgatttacgatgcgctggcgcgcatg
gcgcaggactggtctctgcgcctgccgctgatcgacggacagggcaacttcggctccatc
gacggcgatccgccggcggccgaacgttacaccgagtgccgtctcgaaaaggcagcgcat
tcgcttctcgacgatctcgacaaggaaacggtggatttccgcgacaactatgacggcacc
ttgcatgagccggtcgtcattcccgcgaaattcccgaaccttctggtcaacggggcaggc
ggcatcgccgtcggcatggcgacgaatattccgccgcacaatctttccgaagtcatcgac
ggctgtatcgccctcatcgacaatccggcgatcgagctgcttgaactgatgcagatcatt
tccggcccggactttccgaccggcgcgctcatcatgggccgttccggcattcgctctgcc
tatgagacgggtcgcggatcggtcatcatgcgtggccgtgcgaccatcgagccgatgcgc
ggcgaccgcgagcagatcatcatcaccgaggttccctatcaggtgaacaaggcgacgatg
atcgagaagatggccgaactggtcaaggaaaagcgcatcgagggtatttccgatctgcgc
gacgagtccgaccgccagggttatcgcgtcgtcgtcgagctgaagcgcgacgccaatgcc
gaagtcatcctgaaccagatctatcgctacacgccgctgcagacctccttcggctgcaac
atggtggcgctgaacggcggcaagcctgaacagatgacgctgctggacatgctgcgcgcc
ttcgtgtccttccgtgaggatgtcgtcagccgccgcacgaagtatctgctgcgcaaggcg
cgcgaccgcgcgcatgtgttggtcggtctggcgatctcggttgccaatatcgacgaagtc
atccgcgtcattcgtcatgctcccgatccggcttcggcccgtgaggagctgatgacgcgg
cgctggccggcgcaggatgtggaaagcctgatccgtctcatcgacgatccgcgccaccgc
atcaatgaagacggcacctacaatctctccgaagagcaggcacgcgccattctcgaattg
cgccttgcccgcctgacggcgcttggccgagacgaaatcggcgacgagctgaacaagatc
ggtgcggaaatcagcgaatatctcgaaatcctgtcttcacggctgcgcatcatgcagatc
gtcaaggatgagcttattgccatccgcgacgagtttggcacgccacgccggtccgagatc
gtcgaaggcggtcctgacatggatgatgaagacctcatctcccgcgaagatatggtcgtc
accgtttcgcatctcggctacatcaagcgcgtgccgctgaccacctaccgggcacagcgt
cgcggcggcaagggccgttccggcatggcgacgcgcgacgaagatttcgtcaaccgtctc
tttgtcgccaatacccatacgccggtgctgttcttctcctcgcgcggcatcgtgtacaag
gaaaaggtctggcgccttccgatcggtacgccgcagtcgaagggcaaggccctcatcaac
atgctgccgctggaaccaggcgagcgcatcaccaccatcatgccgttgcccgaggacgaa
acgacctgggaaacgctcgatgtgatgttctcgacgacgcgcggcacggttcgccgcaac
aagctcggcgatttcgtgcaggtcaaccgcaacggcaagatcgccatgaagctggaggag
gagggcgatgaaatcctctccgtcgaaacctgtaccgaccaggatgacgtattgctgacg
acggcactcggccagtgcatccgcttcccggtggacgatgtccgcgtctttgccggccgc
aactcggttggcgtgcgcggcatcaacatggccgatggcgaccgcattatctccatgacc
attgtgggccatgtggaagctgaaccgtgggagcgtgcggcctacctcaagcgttcggct
accgagcggcgtgccgccggggtcgatgaggaagatatcgcactggttggtgaggaagtc
gcggaagaaggcgaactcagcgaagagcgttatcaggaactgaaggcacgcgaagaattc
gtgctgaccgtctctgaaaaaggctacggcaagcgttcttcgtcttacgacttccgcaca
tcgggtcgcggcggcaagggcattcgcgccaccgatacctcgaagacgacggaaatcggc
gaactcgttgcggccttcccggtggacgaaggcgaccagatcatgctggtttccgatggc
ggccagctgatccgtgtgccggtaaacggcatccgtatcgcaagccgcgccaccaagggc
gtgacgatcttctccaccgccaaggatgagaaggtggtttccgtggaacgtatcaacgag
ccggaaggcgacgaagaggcggaaaacggcaatggcgaagatgtggcagacactctgccg
gatacgccagaggcaccggagagcgaggcgtaa
DBGET
integrated database retrieval system
