Agrobacterium tumefaciens H13-3: AGROH133_06150
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Entry
AGROH133_06150 CDS
T01432
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AGROH133_06150 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_06150 (uvrA)
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AGROH133_06150 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AGROH133_06150 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
BCA_ABC_TP_C
SMC_N
DnaJ_CXXCXGXG
AAA_29
AAA_21
PLC-beta_C
Motif
Other DBs
NCBI-ProteinID:
ADY64409
LinkDB
All DBs
Position
circular:1432378..1435206
Genome browser
AA seq
942 aa
AA seq
DB search
MTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLEMMQKPDVDRIEGLSPAISIEQK
TTSKNPRSTVGTVTEIYDYMRLLFARVGVPYSPATGLPIESQTVSQMVDRILAFEEGTRL
YILAPIVRGRKGEYKKELAELMKKGFQRVKVDGQFYEIADVPVLDKKYKHDIDVVVDRAV
VRPDMAARLADSLETCLKLADGLAVAEFADKPLPPEETSAGGSANKSLNETHERMLFSEK
FACPVSGFTIPEIEPRLFSFNNPFGACPTCDGLGSQQKVDENLIVPEPARTLRDGAIAPW
AKSSSPYYNQTLEALGKAFGFKLSSKWTDLSKEAQHAILQGTDDKIEFNYQDGARSYKTV
KNFEGIVPNLERRWKETDSAWAREEIERYMSAAPCPACAGYRLKPEALAVKINRMHIGEV
TQMSIRMARDWFETLPENLNAKQNEIAVRILKEIRERLRFLNDVGLDYLSLSRNSGTLSG
GESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNARLLDTLKHLRDIGNTVIVVEHDED
AILTADYVVDIGPAAGIHGGQVIAEGTPQEVMANPKSLTGKYLSGELGVAVPAERRKPKK
GREIKVFGARGNNLKNVTAAVPLGVFTAVTGVSGGGKSTFLIETLYKSAARRVMGAREIP
AEHERIDGFEFIDKVIDIDQSPIGRTPRSNPATYTGAFTPIRDWFAGLPEAKARGYAPGR
FSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCHGKRYNRETLDVTFKGKSIADVLD
MTVEEGVEFFAAVPAVRDKLQALFDVGLGYIKVGQQANTLSGGEAQRVKLAKELSKRSTG
RTLYILDEPTTGLHFHDVNKLLEMLQALVDQGNSVVVIEHNLEVIKTADWIIDIGPEGGT
GGGEVVATGTPEDIVKNERSYTGHFLKELLERRPAGKREAAE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggctctccggctcgggcaagtcgtcgctcgccttcgacacaatctatgccgag
ggccagcgccgttatgtcgagagcctctcggcctatgcgcgccagttcctcgaaatgatg
cagaagccggatgtagaccgcatcgagggtctttctccggcgatttccatcgagcagaaa
accacctcgaagaacccgcgctccacggtcggcacggtcacggaaatctacgactatatg
cgcctgctgtttgcgcgtgtcggcgtgccctactcgccggcgacgggcctgccgatcgag
agccagacggtcagccagatggtcgaccgtatccttgccttcgaggaaggcacgcgcctt
tatattctcgcgccgatcgtgcgcggccgcaaaggcgaatataaaaaggaactcgccgag
ctgatgaagaagggcttccagcgcgtcaaggtggatggccagttctacgagatcgctgac
gttcccgtcctcgacaagaagtacaaacacgatatcgatgtggtggtagaccgcgccgtc
gtgcgcccggacatggcagcacgccttgccgacagtctcgagacctgcctcaagctcgcc
gacgggttggcagtggccgaatttgccgacaagcccctgccgccggaagaaacctcggct
ggcggctccgcaaacaaatcgctcaatgagacccacgagcgtatgctgttttcggaaaaa
ttcgcctgcccggtctccggcttcaccatcccggaaatcgagccccggcttttctccttc
aacaatcccttcggcgcctgccccacctgtgatggtctgggctcgcagcagaaggtggac
gaaaacctcatcgtgcccgaacctgcacgcaccctgcgggatggcgcgatcgccccctgg
gccaagtcgtcttccccctattacaaccagacgctggaggcgctgggcaaggccttcggt
ttcaagctgtcgagcaaatggacggacctttcgaaagaggcgcagcacgccattctccag
ggcactgacgacaagatcgagttcaactatcaggacggcgcgcgctcctacaagacggtg
aagaatttcgaaggcatcgttcccaatctggagcgtcgctggaaagagaccgacagcgcc
tgggcgcgcgaggaaatcgagcgttatatgtcggcggccccctgcccggcctgcgccggc
tatcgcctgaagccggaagcgctcgccgtcaagatcaacaggatgcacatcggcgaagtc
acccagatgtcgatccgtatggcacgcgactggttcgagacgctgccggaaaatctgaac
gccaaacagaacgagatcgcggttcgcattctcaaggaaatccgcgaacgtctgcgattc
ctcaacgatgtcgggctggattatctcagcctgtcacgcaattccggcacgctttccggc
ggagaaagccagcgcatccggcttgcttcgcagatcggctccggcctcaccggcgttctc
tatgttctggatgagccgtccatcggcctgcatcagcgtgacaatgcccgtctgctcgat
acgctgaaacatctgcgtgatatcggcaatacggtgattgtggtcgaacacgacgaggat
gccattctgacggcggattacgttgtcgatatcggccccgccgccggtattcacggcggt
caggtcatcgccgaaggcacgccgcaggaagtgatggccaatccgaagtcgctgaccggc
aaatatctatccggcgagctcggcgtcgccgtgccggcagaacgccgcaagccgaagaag
ggccgcgaaatcaaggtttttggcgcacgcggcaacaacctgaagaatgtgactgcggcc
gttccccttggcgttttcaccgccgttaccggcgtgtcgggtggtggcaaatccacattc
ctgatcgagacgctctataagtcggcagcacgccgggtgatgggcgcgcgcgaaatcccg
gccgagcatgaacgcatcgatggtttcgaattcatcgacaaggtgatcgatatcgaccag
tcgccaatcggccgcacgccacgatcaaaccccgccacctacaccggcgcatttacgcct
atccgtgactggttcgccggtctgccggaggctaaggcgcgcggttatgcacctggccgt
ttctccttcaacgtcaagggcggccgctgcgaagcctgccagggcgacggtgtcatcaag
atcgagatgcacttcctgccggatgtttatgtcacctgcgacgtctgccacggcaagcgt
tataatcgcgagacgctggatgtgaccttcaagggcaagtccattgccgacgtgcttgat
atgacggtggaagaaggcgttgagttcttcgccgccgttccggccgtgcgtgacaagctg
caagcgctgttcgatgtcggcctcggttacatcaaggtcggccagcaggccaatacgctc
tccggcggcgaggcgcagcgcgtcaagctcgccaaggaactgtcgaaacgctccaccggc
cgcacgctctacattctcgatgagccgacgacgggtctccatttccacgacgtcaacaag
cttctggaaatgctgcaggcgctggtggatcagggcaattccgtcgtggtaatcgagcac
aatctcgaagtcatcaagacggccgactggatcatcgatattggccccgaaggcggcacg
ggcggcggcgaagtggtggcaaccggcacgccggaagacatcgtcaagaacgagcgatcc
tataccggccatttcctgaaggaacttctggaacgccggccagccggaaaacgcgaggct
gcggagtaa
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