Agrobacterium tumefaciens H13-3: AGROH133_06337
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Entry
AGROH133_06337 CDS
T01432
Symbol
secD
Name
(GenBank) bifunctional preprotein translocase subunit SecD/SecF
KO
K12257
SecD/SecF fusion protein
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02024
Quorum sensing
agr03060
Protein export
agr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AGROH133_06337 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AGROH133_06337 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AGROH133_06337 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
agr02044
]
AGROH133_06337 (secD)
Secretion system [BR:
agr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AGROH133_06337 (secD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
SecD-TM1
MMPL
Sterol-sensing
FLgD_tudor
RE_XcyI
PIGBOS1
Motif
Other DBs
NCBI-ProteinID:
ADY64502
LinkDB
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Position
circular:complement(1514490..1517054)
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AA seq
854 aa
AA seq
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MLHFSRWKTVFIWLLVLASVFIASPNLFSDKQLEGMPAWYKDNKVTLGLDLQGGSHIMLK
IERSDIVKERLETIVGDVRTQLRDANIRYSGLTGNGQQIQVRISDPAQYEAAKTALRDLT
QPVSAGTLVGGSITEVTMNDGGDNLLRLNLTDEGVDYRLSSAVSQSIEVVRRRVDEVGTT
EPLIQRQGSDRIIVQVPGLQDPQRLKSLLNQTAKLSFRMVDTTMPVQEAMNGRPPATSEV
LYSQDDPPVPYLVERRALVSGDNLVDAQASFNQQTNEPVVTFRFDSRGAQRFAQATQQNV
GKPFAIVLDNQVISAPVIREPIIGGSGQISGSFSVQGANDLAVLLRAGALPATLTVVEER
TVGPSLGNDSITAGLTASAIGAVGVLIFMFVFYGFFGLLANIALIVNVVMLIAVLSVIGS
TLTLPGIAGIVLTIGMAVDSNVLIYERIREEVKSGKPLIQSLDNGFTRAFATIIDANLTT
LIVASVLFYMGTGPVKGFAVTLAVGIITTVFTAYTLTAWMFGYWVRRSRPKHLPKGVRTA
MFDGRDIPFMRYRRVVFMITGVIMLACVGGFVAKGLNLGIDFQGGSVIEVRAKQGEADLA
DIRERLNQLNLGEIQAQNFGTPQDVLIRIQAQDGGENAEQSAITLVRGELQDKYDFRRVE
VVGPAVSGDLTVTSTIGVVLAMAAIMIYIWVRFEWQFALGAVISMVHDVVFTIGLFVFLG
IEFNLTSIAAILTIIGYSLNDTVVIYDRVRENLRRYKKMPLSMIIDVSLNQTLSRTILTG
LTVLLALLALYLFGGEVIRSFTFAMLFGVGIGVFSSVYIAAPVLIAFKLRPDSKDAEDEK
DEKSGNAIGGKPAV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatttttcccgttggaaaacagtctttatctggttgcttgtgctggcaagcgtc
ttcatcgcatctcccaacctgttttcggacaagcagctggagggcatgcctgcctggtac
aaggacaacaaggtaacgctcggtctcgaccttcagggcggctcccacatcatgctcaag
atcgagcgttccgacatcgtcaaggaacggcttgaaacgatcgtgggtgacgtgcgcacg
cagcttcgcgacgccaacatccgctattcgggccttacgggcaatggccagcagatccag
gttcgcatcagcgatcccgctcagtatgaagcggcgaaaaccgcgcttcgcgacctgacg
cagccggtgtccgccggaacgctggtcggcggttccatcacagaagtgacgatgaacgac
ggcggcgacaatctgctgcggctcaacctgaccgatgaaggcgtggattatcgcctgtcc
tcggccgtgtcgcagtccatcgaggtcgtgcgccgccgtgttgacgaagtcggcaccacc
gaacctctcatccagcgtcagggttccgaccgcatcatcgtacaggtgccgggcctccag
gatccgcagcgcctgaaatcgcttctcaaccagacggcaaagctgtccttccgcatggtc
gataccaccatgccggtgcaggaagcgatgaatggccgtccgcccgcgacctcagaggtt
ctttattcgcaggacgatccgccggttccctatctggtggaacgccgcgcgctcgtttcc
ggcgacaacctcgtcgatgcgcaggcaagcttcaaccagcagaccaacgaacccgtcgtc
accttccgtttcgacagccgcggtgcgcagcgctttgcgcaggcgacgcagcagaatgtc
ggcaagcctttcgccatcgtgctcgacaatcaggtcatttccgcacctgtcatccgtgag
ccgatcatcggcggttcgggacagatttccggcagtttctcggttcagggcgccaacgac
cttgcagtcctgttgcgtgcgggcgcacttccggccacgttgaccgtggttgaggaacgc
accgtcggtccgagccttggtaacgactctatcaccgccggcctcacggcgagcgccatc
ggtgctgtcggcgtcctcatcttcatgttcgtcttttatggcttcttcggcctgcttgcg
aacatcgccctcattgtcaacgtggtcatgctgatcgccgtcctcagtgtgatcggatct
acgctcaccttgcccggtattgcgggtatcgtcttgacgatcggtatggcggtggactcc
aacgttctgatctacgagcgaatacgcgaagaggtgaagagcggaaaaccgctgatccag
tcactggataatggtttcacacgcgcctttgcgaccattatcgacgccaacctgacgacg
ctgatcgttgcaagcgtgctgttctacatgggtacgggtccggtcaagggctttgccgtc
acgcttgcggtcggtatcatcaccaccgtcttcacggcctatacgctgacggcctggatg
tttggctactgggttcgccgcagccgtccgaaacatctgccgaagggtgtacgcaccgcc
atgttcgacggtcgcgacattccgttcatgcgttatcgccgtgtggttttcatgatcacc
ggtgtgatcatgctcgcctgcgtcggcggcttcgtcgccaagggcctgaacctcggcatc
gatttccagggcggctcggttatcgaagtgcgcgccaagcagggtgaggccgatctcgca
gatattcgcgagcgtctgaaccagctgaacctcggtgaaatccaggcacagaatttcggc
acgccgcaggacgttctcatccgcattcaggcgcaggacggcggcgaaaatgccgagcag
tcggcaatcaccctggtgcgcggcgagttgcaggacaagtatgatttccgtcgcgtggaa
gtcgttggtccggccgtgtccggtgacctgaccgtgacctccacgatcggcgttgtgctc
gccatggcggcgatcatgatctacatctgggttcgcttcgagtggcagtttgcgctgggt
gcggtcatctcgatggtgcacgacgtggtcttcaccatcggcctgttcgtcttcctgggt
atagagttcaacctgaccagtatcgcggcgatcctgacgatcatcggttattcgctgaac
gatacggtggtcatctacgaccgtgtccgtgaaaacctccggcgatacaagaagatgcca
ctttcgatgatcatcgacgtctcgctgaaccagaccctttcgcgcacgatccttactggt
ctgaccgtgcttctggcactgctggcactgtatctgttcggtggcgaggtcattcgttcc
ttcaccttcgccatgttgttcggcgtcggtatcggcgtgttctcctcggtctatatcgcg
gctccggtgctgatcgccttcaagctgcgtcccgacagcaaggatgcggaagatgagaag
gatgagaagtccggcaatgccatcggcggcaagcctgccgtctga
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