Agrobacterium tumefaciens H13-3: AGROH133_06435
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Entry
AGROH133_06435 CDS
T01432
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
agr01002
]
AGROH133_06435
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agr01011
]
AGROH133_06435
Peptidases and inhibitors [BR:
agr01002
]
Cysteine peptidases
Family C82
AGROH133_06435
Peptidoglycan biosynthesis and degradation proteins [BR:
agr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AGROH133_06435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
HH_AprE
Motif
Other DBs
NCBI-ProteinID:
ADY64549
LinkDB
All DBs
Position
circular:complement(1562608..1564545)
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AA seq
645 aa
AA seq
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MKLDAPSSLAALGATRIKLQVTSGKTSAALVLALGLSVSTALPGSAGAVTLMDLLRGGPG
KVARDRGEMPPAGIVTSPPTVGPSADASDPEPLPRVSGPRYYDYKADTARAVNTANFGEG
LANVKFSATPEIGKALEAYYGAGGKALWVSEGELTARANAVMAFLETVGESGLDPADYSI
SVPAKDVTASISAGANASGTPVEVASASTSDAYQRAQMQFELALSAKVLAYVQDTTRGRV
DPNRLSGYHDFKRKTVNLAPVLKLAGLSPDIAAYLRSREPSNAEYLALKAELARLRSEGD
AANTVKVPADLVLKPGNSSGDMASVVKAIEHRASPAFKAEHAAIISGYQQTPDYTPDLVD
LVKAFQSENGLKADGVIGRATVRAMVGESNDARIAKVQVAMEQIRWLPADLGQRYVLINQ
PAFMAYYHNDGQEQFGMKVVVGSKANQTYFFQDEIQTVEFNPYWGVPQSIIVNEMLPKLR
RDPSYLDRLGYEVQVGGRAVSSTSVNWFGSTNAVSVRQPPSSDNALGDLKILFPNAHAIY
MHDTPAKSFFNRDMRALSHGCIRLVDPRRMAAAVLGTSVDKVNEQIAAGKNRAVQVPVKI
PVYVAYFTAWPDKAGKVQFFDDVYDRDSYVQKAFAVTTKARAASI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggatgctccgtcttcgttggcggcgctgggtgctacgaggatcaaattgcaa
gtcacatctggaaaaacatcggcagcgctggtgctggctctcggtctttccgtttccacc
gctcttcccggcagtgccggcgcggtaacgctgatggaccttttgcgtggcgggcctggc
aaggttgcgcgcgatcgcggtgaaatgccgccagccggtatcgtcacctcgccgccgacg
gtcggaccgagcgccgatgcatccgatcccgagcctctgccgcgtgtttccggtccacgt
tattacgattacaaggctgataccgcacgcgctgtgaacaccgccaatttcggcgagggt
cttgccaatgtgaagttcagcgccacccccgaaatcggcaaggctctggaagcctattac
ggtgccggcggcaaggcgctctgggtttcggaaggcgagctgactgcccgcgcgaacgcc
gtcatggcgtttttggagactgttggcgaaagcggcctcgatccggccgattacagcatt
tcagtacccgcaaaggacgtaaccgccagcatcagcgccggcgcgaacgcatccggcacg
ccggtggaagtggcttccgcatcgacctccgacgcctatcagcgcgcgcagatgcagttc
gagcttgcgctttccgccaaggtcctggcctatgtgcaggatacgacgcgtggtcgtgtc
gatcctaaccggctgtccggttaccacgatttcaagcgcaagacggtgaaccttgcgccc
gtgctgaagcttgcaggcctcagcccggatatcgcagcctatctgcgcagccgtgaacct
tcgaacgccgaatatctggcgctgaaggccgaactggcccggttgcgcagcgagggtgat
gcggccaacacggtcaaggtccccgccgatctggtgctgaaacccggcaacagcagcggc
gacatggcgagcgtcgtcaaggcaatcgaacatcgcgcttcgcctgccttcaaggcggaa
catgcggcgatcatttccggctaccagcagacgccggattatacgcctgatctcgttgat
ctggtgaaggcattccagagcgaaaacggcctgaaggccgacggcgtcatcggccgcgcg
accgtgcgtgccatggtcggcgaaagcaatgacgcccggattgccaaggtgcaggtggcg
atggagcagatccgctggctgccagccgatctcggccagcgctatgtcttgatcaaccag
cccgccttcatggcctattaccacaatgacggacaggaacagttcggcatgaaggtggtg
gtcggctccaaggccaaccagacctacttcttccaggacgaaatccagaccgtcgaattc
aacccctattggggcgttccgcagtcgatcatcgtcaacgagatgctgccgaagctgcgc
cgcgatccgtcctatctcgaccgtctgggttatgaggtacaggtgggtggccgtgcggtt
tcttccaccagcgtcaactggttcggctcgactaatgccgtttcggtgcgtcagccgcca
agcagcgacaatgcgctgggcgacctgaaaatcctgttcccgaatgcgcatgctatttac
atgcatgatacgcctgccaagagcttcttcaaccgcgacatgcgggcgctgagccacggc
tgtatccgtctggtcgacccgcgccgcatggcggcggcggtgcttggcaccagcgtcgac
aaggtcaacgagcagattgcagcgggcaagaaccgcgccgtgcaggtgccggtgaagata
ccggtctacgtggcctattttaccgcctggccggacaaggccggcaaggtgcagttcttc
gacgacgtctacgaccgtgacagctatgtccagaaggcgtttgcggtaacgacgaaggcg
cgggccgcgtcgatttga
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