Agrobacterium tumefaciens H13-3: AGROH133_06552
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Entry
AGROH133_06552 CDS
T01432
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00300
Lysine biosynthesis
agr00470
D-Amino acid metabolism
agr01100
Metabolic pathways
agr01110
Biosynthesis of secondary metabolites
agr01120
Microbial metabolism in diverse environments
agr01230
Biosynthesis of amino acids
Module
agr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AGROH133_06552 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AGROH133_06552 (lysA)
Enzymes [BR:
agr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AGROH133_06552 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ADY64605
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All DBs
Position
circular:1624339..1625661
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AA seq
440 aa
AA seq
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MARWITARWCANGWIMAPTDKPQSHGPALAAAEFAVDENDLVIGGLAVRDIVAETGTPCF
LYDASAMRRAYRDLATALSGFADIYYSVKANPLPAIVSLFRQEGAGAEIASVGEYRAAIK
AGIPPENIIFAGPGKRQAELLEVIESGTGEIHIESAEEITRIEAIGRPVKASIRINPVPD
AQAGAMRMGGKATAFGFDEEELENVLPLFRDIRHINLVGVHIYGGTQILDADMLVSQWRH
SILLAARMAEMLGRPLETIDLGGGLGIPYFAGETPLDLAAVSAAIPDLKALVQAHPLIAD
AHIIVEPGRFLAGPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPI
VAPAMMQADYEETATIVGPLCTPLDTLARNAALPKLKAGDLLAILQSGAYGATASPSGFL
SHPAAKEVLVENGAFEVIGR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggtggattaccgcgcgctggtgcgcgaacggatggataatggcgcccacggat
aaaccccaaagccacggccctgcccttgccgccgcggaattcgcagtcgacgaaaacgat
cttgtcatcggcggccttgccgtgcgcgatatcgtcgctgagaccggaacgccgtgcttc
ctctatgatgccagcgccatgcgccgcgcctatcgcgatctcgcaaccgcgctcagtggt
tttgccgatatctattattcggtgaaggccaatcccctgcccgccatcgtctcgcttttc
cgacaggaaggtgcgggtgcggaaatcgcctccgtcggtgaatatcgcgccgccatcaag
gcgggcataccgccggaaaatatcatcttcgccggtcccggcaagcgccaggccgaattg
cttgaggtgatcgagagcggcaccggcgaaatccatatcgagagcgccgaggaaattact
cgcatcgaggccatcggcaggccggtcaaggcttcgatccgcatcaatccggtgccggat
gcgcaggcaggcgccatgcgcatgggtggcaaggccaccgccttcggttttgacgaggaa
gaactcgaaaacgtcctgccgctgttcagggacatcaggcatatcaatctcgtcggtgtc
catatttacggtggcacgcaaatcctcgatgccgacatgcttgtctcccaatggagacac
tccattttgcttgccgcacgcatggccgaaatgcttggcaggccacttgaaaccatcgat
ctcgggggcggtctcggcatcccctatttcgccggggagacgccgctcgatcttgcagcg
gtcagtgccgccattcccgacctcaaggccttggtgcaggcacatccgctgatcgccgat
gcccatatcattgtcgaacccggccgcttcctcgccggtcccggcggcatctatgtggcg
gaagtcaattcggtaaagacctcgcgcggcaccaccttcgtggtgacggatggtggcatg
catcaccatctggcagcctccggcaatctcggccagatcgtcaagcgcaactaccccatc
gtcgcaccggccatgatgcaggcagactatgaggaaacggcaaccatagtcggcccgctc
tgcacaccgctcgacacgctggcacgcaatgcggccctgccgaagctgaaggctggtgat
ctcctggcaatcctgcaatcgggcgcctatggcgccaccgccagcccttcgggttttctc
agccatccggcggcgaaggaagtgctggtggagaatggtgcgtttgaggtgatagggcgc
tga
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