KEGG   Agrobacterium tumefaciens H13-3: AGROH133_06665
Entry
AGROH133_06665    CDS       T01432                                 
Symbol
nrdE
Name
(GenBank) ribonucleotide-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
agr  Agrobacterium tumefaciens H13-3
Pathway
agr00230  Purine metabolism
agr00240  Pyrimidine metabolism
agr01100  Metabolic pathways
agr01232  Nucleotide metabolism
Module
agr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
agr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:agr00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    AGROH133_06665 (nrdE)
   00240 Pyrimidine metabolism
    AGROH133_06665 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agr03400]
    AGROH133_06665 (nrdE)
Enzymes [BR:agr01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     AGROH133_06665 (nrdE)
DNA repair and recombination proteins [BR:agr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    AGROH133_06665 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: ADY64659
LinkDB
Position
circular:1679307..1683125
AA seq 1272 aa
MRIERRFTKPGQSSYAEIEFRKAVSEIKNPDGSIVFRLADIDVPAQFSQVATDVLAQKYF
RKAGVPKVLKKVEENDVPSFLWRSVADEKAMKDLPEGERYGSETDARQVFDRLAGTWTYW
GWKGKYFSTEEDALAFRDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSSYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSYLRG
EGEKLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWKVNE
EQKVAALVTGSKIVAKHLKAIMKACVNCEADNGDCFDPAKNPALKREIRAAKKDMVPENY
VKRVIQFAQQGYKDIQFKTYDTDWDSEAYLTVSGQNSNNSVSLKDDFLRAVENDGDWNLT
ARKDGKVMKTLKARDLWEKISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEYM
FLDDTACNLASLNLLQFKDQATKRIDIADYEHAVRLWTVVLEVSVMMAQFPSRQIAERSY
EYRTLGLGYANIGGLLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEMAGELGPFPGF
APNRDNMLRVIRNHRRAAHGLSYGYEGLSVNPVALIHSDCTDQDLVAHATAAWDKALELG
EKHGYRNAQTTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPESLR
SLGYSESQIAEIEAYAVGHGNLNQAPAINPSSLKAKGFTDEKIEAVNGALKSAFDIKFVF
NQWTLGADFLKGTLKVSDEQLSDMSFNLLEHLGFSKKDIEAANVHVCGAMTLEGAPFLKN
EHLAVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCGAAYM
LSWKLALKANALYRDGSKLSQPLNASLVEDEDDEDFVEELIQQPLAQQAVTITEKIVERV
IERVSREREKLPNRRQGYTQKATVGGHKVYLRTGEFGDGRIGEIFIDMHKEGAAFRAMMN
NFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVQGNDAIKNATSILDYVFRELAVSYLG
RHDLAHVDTSDFSNTALGKGIQEGKTNLLSTGWTRGYKPTLVSNNEGERAASEPKGSATA
APARASANVTSFAGSAARKLEPTVAISTSEIVSFKRDYEERAKELAEEIAEEVIDDVVQE
AKQTATALFSDKAAADAASAKAEAKKKENERRMRSIAQGYTGNMCSECQNFTMVRNGTCE
KCDTCGATSGCS
NT seq 3819 nt   +upstreamnt  +downstreamnt
atgcgcatcgaacgccgcttcacgaagcccggccaatcgtcttatgcggaaatcgaattc
cgcaaggccgtcagtgaaatcaagaacccggacggttccatcgtgttccgtctggcggat
atcgacgttcccgcgcagttcagccaggtcgcgaccgacgttctggcgcagaaatacttc
cgcaaggccggcgtgccgaaggtgcttaagaaggttgaggaaaacgatgttccttccttc
ctgtggcgttcggttgccgatgagaaggccatgaaggacctccccgagggtgagcgttat
ggctccgaaaccgatgcgcgtcaggttttcgaccgcctggccggcacctggacctactgg
ggctggaagggcaaatatttctccaccgaggaagacgcactcgccttccgcgacgagctt
gcctatatgctggcgacccagcgtgtagcccccaacagcccgcagtggttcaacaccggc
ctgcactgggcctatggcatcgacggcccgggccagggccacttctacgtcgaccccttc
accggcaagctgaccaagtccaagtcctcttacgaacatccgcagccgcatgcctgcttc
atccagtctgtcgaagacgatctggtcaacgaaggcggcatcatggacctgtgggtgcgt
gaagcgcgcctgttcaaatacggttccggcaccggctccaacttctcctacctgcgcggc
gaaggcgaaaagctttccggcggcggcaagtcctccggcctgatgagcttcctcaagatc
ggcgaccgggcagccggcgcaatcaagtccggcggcaccacccgccgtgcggccaagatg
gtcgtcgttgatgccgaccatcccgatattgaagcctatatcgactggaaggtgaacgag
gagcagaaggttgccgctctcgtcaccggttccaagatcgttgccaagcacctcaaggca
atcatgaaggcctgcgtcaattgcgaggcagataacggcgattgcttcgacccggccaag
aaccctgccctgaagcgcgaaatccgcgctgccaagaaggacatggtgccggaaaactac
gtcaagcgcgtcatccagttcgcgcagcagggttacaaggacatccagttcaagacctac
gacacggattgggattccgaagcctacctcacggtttcaggccagaattccaacaactcc
gtatcgctgaaggatgacttcctgcgcgctgttgaaaacgacggtgactggaacctgacc
gcccgcaaggacggcaaggtcatgaagacgctgaaggcccgcgacctatgggaaaagatc
tcccacgccgcctgggcatcggccgaccccggcctgcacttcaacaccaccatgaacgac
tggcacacctcgccggccgaaggccccatccgcgcttccaacccgtgctcggaatatatg
ttcctcgacgacacggcctgcaaccttgcttcgctgaacctgcttcagttcaaggatcag
gcaacgaagcgcatcgacatcgccgattacgaacatgcggttcgcctgtggaccgtcgtt
ctcgaagtctcggtcatgatggcgcagttcccctcgcgccagattgccgaacgctcctat
gaataccgcacgctcggcctcggttatgccaatatcggcggcctgctgatgtcctcgggc
attccctatgacagcgacgaaggccgcgccatcgccggtgcgctgaccgccatcatgacc
ggcgtttcctatgccacctcggctgaaatggctggcgagcttggccccttcccgggcttt
gcgccgaaccgcgacaacatgctgcgcgtcatccgcaaccaccgccgcgccgcccatggc
ctttcctacggttatgaaggcctgtcggtgaacccggttgccctcatccattccgattgc
acggatcaggaccttgtcgcccacgctaccgccgcctgggacaaggcgctggagcttggc
gaaaagcacggctaccgcaacgcccagaccaccgttatcgcgccgacaggtacgatcggt
ctcgtgatggattgcgacacgaccggcatcgagccggacttcgcgctggtgaaattcaag
aagcttgccggcggcggctacttcaagatcatcaaccgcgccgtgccggaatccctgcgt
tcgctcggttattcggaaagccagatcgccgaaatcgaagcctatgccgttggtcacggc
aatctcaaccaggcacctgccatcaatccctcgtcgctgaaggccaagggcttcaccgat
gagaagatcgaagccgtgaacggcgcgctgaaaagcgccttcgacatcaagttcgtcttc
aaccagtggacgctgggcgccgatttcctcaagggcacgctcaaggtttccgatgagcag
ttgtccgacatgagcttcaacctgctggagcacctcggcttcagcaaaaaggacatcgaa
gcggccaatgtgcacgtctgcggtgcgatgacactggaaggcgcaccgttcctcaagaac
gagcacttggccgtattcgattgcgccaacccctgcggcaagatcggcaagcgttatctc
tcggtcgaatcgcatatccgcatgatggcggcagcacagccgttcatttcgggtgcgatc
tccaagacgatcaacatgccgaatgatgcaaccgtggaagattgcggcgcagcctacatg
ctgtcctggaagctggcgctcaaggccaacgccctttaccgcgatggctccaagctttcc
cagccgctcaacgcttcgctggtggaagatgaggacgacgaagacttcgttgaagaactg
atccagcagccgctcgcccagcaggccgtgacgatcaccgaaaagatcgtcgagcgcgtc
atcgagcgggtatcgcgcgagcgtgaaaagctgccgaaccgccgtcagggttacacccag
aaggcaacggtcggcggtcacaaggtctatctgcgcaccggcgaattcggtgacggccgc
atcggcgaaatcttcatcgacatgcacaaggaaggcgctgccttccgtgcgatgatgaat
aacttcgccatcgccatttcgcttggcctgcaatatggcgtgccgctggaagaatatgtg
gaggccttcaccttcaccaagttcgagccggccggcatggtgcagggcaacgacgcgatc
aagaacgccacgtcgatcctcgactacgtgttccgcgaactcgccgtctcctatctcggc
cgccacgacctcgcccatgtcgatacctctgacttctccaataccgcacttggcaagggt
atccaggaaggcaagaccaatctgctctccaccggctggacacgcggttacaagccgacg
ctggtttccaacaacgaaggcgaacgtgctgcttccgaacccaagggctcggcaacggca
gcccccgcccgtgcctcggccaacgtcacttcctttgcaggctcagccgcccgtaagctg
gaaccgacagtcgcgatctccacctcggaaatcgtctccttcaagcgtgattatgaagaa
cgcgccaaggaactggcggaagagattgccgaagaggtaatcgacgacgtggtccaggaa
gccaagcagaccgccaccgccctcttctccgacaaggccgccgccgacgcggcatcggcc
aaggcggaagccaagaagaaggaaaacgaacgccgcatgcgctcgatcgcgcaaggctat
accggcaacatgtgctcggaatgccagaacttcacgatggtgcggaatggcacttgcgag
aagtgcgatacttgcggtgcgacgagcggttgctcgtaa

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