Agrobacterium tumefaciens H13-3: AGROH133_07219
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Entry
AGROH133_07219 CDS
T01432
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AGROH133_07219 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_07219 (uvrB)
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AGROH133_07219 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AGROH133_07219 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
UB2H
SWI2_SNF2
DUF2963
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ADY64914
LinkDB
All DBs
Position
circular:1915564..1918695
Genome browser
AA seq
1043 aa
AA seq
DB search
MKRNRILSKRIRPLCNVSGQILFPALRFLFVLIFSWPPLPFARDSLHISRMARSPKNSKP
SNSGFEEAPQSSFEGAPLSGSVADWVKQLEAEAEAGSVETQREVASKAGKHRKKIEIEAR
KEAEKATNKTAKNTTASKTARGVSIGASSDPKTRAAAGLNPVAGMDVSLEEAANLAPGAV
TATVEALSALIESGNPLFKDGKMWTPHRPARPPKSEGGVTIRMNSEYQPAGDQPTAIADL
VEGINSGERSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLYSEFKNFFPDN
AVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHSATRSLLERDDCIIVASVSC
IYGIGSVETYTAMTFQMQVGDRLDQRQLLADLVAQQYKRRDMDFQRGSFRVRGDTIEIFP
AHLEDAAWRISMFGDEIDSITEFDPLTGQKTGDLQSVKIYANSHYVTPRPTLNGAIKSIK
EELRVRLAELEKAGRLLEAQRLEQRTRYDIEMLEATGSCAGIENYSRYLTGRNPGEPPPT
LFEYIPDNALLFIDESHVSVSQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDA
MRPLTVAVSATPGSWEMEQAGGVFAEQVIRPTGLIDPPVEVRSARSQVDDVLGEIRETAA
KGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGIN
LLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADNITGSMKRA
MEETSRRREKQMAYNAEHGITPESVKAKISDILDSVYERDHVRADISGVSGKGFADGGHL
VGNNLQSHLNALEKSMRDAAADLDFEKAARLRDEIKRLKATELAVMDDPMAKEEAKSLEG
GGRSKKKETSARNGSISPPAGDISGGTEDGAASANESGKSLFAKPSLDEMGPGSDTGKPL
FRRNTLDEMTVGRTEKPVRGEVPGKPETETGKRFSPLMEGQPERTKDDPRPLVRGKIGAG
SYEDAGEQKRKSRTKGKTGRPGR
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggaaccggattctatcaaagcgtattcggccgctatgcaacgtatccggccaa
attttgttccccgcgcttcgtttcctttttgtactcattttttcttggcctccccttccc
tttgcgcgtgactccctccatatttcgcgcatggccagatcacccaaaaattccaaaccc
tcgaattccggcttcgaggaagctccgcaatcgtcgttcgaaggcgcgccgctcagcggc
agcgttgccgattgggtaaagcagctcgaggcggaagccgaagccggctcggtggaaacc
cagcgcgaagtcgcctcgaaagctggcaagcaccgcaagaagatcgagatcgaagcgcgc
aaggaagcggaaaaagcgaccaacaaaacggctaaaaacaccacggcttccaagacagcg
cgcggcgtttccatcggcgcgtcgagcgatccgaaaacccgcgccgccgccggtctcaat
ccagtggctggcatggacgtttccctggaggaggcggccaatctcgcaccaggtgccgtc
accgccaccgtcgaggcgctatcggcgcttatcgagagcggcaacccgctgttcaaggac
ggcaagatgtggacgccgcaccggccggcccgtccgccgaaatccgaaggcggcgttaca
atccgcatgaactcggagtatcaaccggcaggcgaccagccgacggcgattgccgatctc
gtggaaggcatcaattccggcgagcgcagccaggtgctgctcggcgtcaccggctccggc
aagaccttcaccatggccaaggtgatcgaggcaacccagcgcccggccgtcatccttgcg
cccaacaagacgctggccgcgcagctctattccgagttcaagaacttcttccccgacaat
gcggtagagtacttcgtctcatattacgattattatcagccggaagcctatgtgccgcgc
tccgacaccttcatcgagaaggaatcctcgatcaacgaacagatcgaccggatgcgtcac
tccgcgacccgctcgctgctggaacgcgacgactgcatcatcgtcgcttcggtttcctgc
atctatggtattggctcggtggaaacctatacagccatgaccttccagatgcaggtgggc
gaccggctggaccagcgccagcttctggccgaccttgtggcccagcaatacaagcgccgc
gatatggatttccagcgcggctccttccgcgtgcgcggcgataccatcgaaatcttccct
gcccaccttgaggatgccgcctggcgcatctcgatgttcggcgacgaaatcgattccatt
accgaattcgacccgctgaccggccagaaaaccggcgatctgcaatccgtcaagatctac
gccaattcgcactatgtcaccccgcgcccgacgctgaacggcgcgatcaagtcgatcaag
gaagagctgagggtccgcctcgccgagctggaaaaggcgggacgcctgctggaagcccag
cggctggaacagcgcacgcgttacgacatcgaaatgctggaggcgaccggctcctgcgcc
ggtatcgaaaactattcgcgttatctcacgggccgcaatcccggtgaaccgccgccgacg
ctgtttgaatatatccctgataatgcgctgctttttattgacgaaagccacgtctcggtt
agccagatcggtggcatgtatcgcggcgacttcaggcgcaaggcgacgctggccgaatat
ggcttccgccttccctcctgcatggataaccgcccgttgcgctttgaggaatgggatgcg
atgcggccgctgacggtcgcggtttcggccacccccggctcgtgggaaatggaacaggcc
ggcggcgtcttcgccgaacaggtcatccgcccgacaggactcatcgatccgccggtcgag
gtgcgctccgcccgcagccaggtagacgatgttctcggcgaaattcgcgagaccgccgct
aaaggttaccgcacgctctgcactgtgctgaccaagcgcatggctgaagacctgaccgaa
tatttgcacgaacagggcgttcgcgtgcgttacatgcactcggatatcgacacgctggaa
cgcatcgagatcatccgcgacctgcgccttggtgccttcgatgtgcttgtcggtatcaac
cttctgcgcgaaggcctcgatattccagaatgcggtttcgtcgcgatcctcgatgccgac
aaggaaggcttcctgcgttcggaaacttcgctgatccagaccatcggccgcgccgcccgt
aacgtcgacggcaaggtcatcctttatgccgacaatatcaccggctcgatgaagcgggcg
atggaggaaacctcccgccgccgcgaaaagcagatggcctataacgccgaacacggcatc
acgccggaatcggtcaaggcgaagatctccgatattcttgattcagtttatgaacgtgat
cacgtaagggccgatatttcaggcgtttccggcaaaggcttcgccgatggcggccatctg
gtcggcaacaatctgcagtcccatctcaacgcgctggaaaaatccatgcgcgatgccgca
gccgatctggacttcgaaaaagccgcccgcctgcgtgacgaaatcaagcgcctcaaggcc
accgaactcgccgtcatggacgacccgatggcgaaggaagaggcgaaatcgcttgagggt
ggcggcagaagcaagaaaaaagaaacgagcgcgcgcaacgggtcgatctcccctcctgcg
ggagacatatcgggcgggacagaggacggtgccgcttccgcaaacgaaagtggaaaatct
ctcttcgccaaaccttcgctggacgaaatggggcccggctcggacacgggcaagccgctg
ttccgcaggaacacgctggacgagatgaccgttggccgcaccgagaagccggtgcgtggc
gaagttcccggcaaacccgagacagaaaccggcaaacgtttctcaccgctcatggaaggc
cagcctgagcgaaccaaggacgatccccgccccctcgtgcgcggcaagatcggagcgggt
tcctatgaggatgccggcgaacagaagcgcaaaagccggacgaaggggaagaccggccgg
cccggtcgctga
DBGET
integrated database retrieval system
