Agrobacterium tumefaciens H13-3: AGROH133_07633
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Entry
AGROH133_07633 CDS
T01432
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00220
Arginine biosynthesis
agr00240
Pyrimidine metabolism
agr00250
Alanine, aspartate and glutamate metabolism
agr01100
Metabolic pathways
agr01110
Biosynthesis of secondary metabolites
agr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AGROH133_07633 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AGROH133_07633 (carB)
00220 Arginine biosynthesis
AGROH133_07633 (carB)
Enzymes [BR:
agr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AGROH133_07633 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
YopH_N
Motif
Other DBs
NCBI-ProteinID:
ADY65082
LinkDB
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Position
circular:2100752..2104078
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AA seq
1108 aa
AA seq
DB search
MTDPGLADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVE
MIGAKPEAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKKHEAARAELKAKLS
GAELDKALDDLENQWNLGETDRKQRYMAHAIAIAAQAIDHVGLPAIIRPSFTLGGTGGGI
AYNRSEFFDIVSGGLDASPTTEVLVEESVLGWKEYEMEVVRDTADNCIIICSIENIDPMG
VHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMN
PRVSRSSALASKATGFPIAKIAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPR
FAFEKFPGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLDEIEIPGFEEGE
GSKNAIRAAIGTPTPDRLRMVAQALRMGMTEEEVHENSKIDPWFIAQFKAIVDMEARVRE
QGLPQDAENLRMLKAMGFSDARLAILTGKRPKEVAELRNSLNVRPVFKRIDTCAAEFASP
TAYMYSTYEIPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGF
EAIMINCNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKL
AEALEKNGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGF
PLVVRPSYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNP
LLFDSYLTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDEL
ERQTTALAKALNVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVM
AGEKLDAAIAAYGKKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDF
ALAFAKSQLGAGVDLPRSGTVFVSVRDDDKDRVLPAIRILVESGFRVLATGGTQRFLAEQ
GINAEKINKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTM
AGAEAAALAIKALKAGNLEVKPLQSYFL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccgggcctcgccgacgcaacctatgtcgagccgatcaccccggaagtcgtt
gccaagatcatcgccaaggaacgcccggacgcgctgctgcccaccatgggcggccagacc
gcgctcaacaccgcgctgtccctgaagcgcatgggcgttctcgaccgctacaatgtggaa
atgatcggcgccaagcccgaagccatcgacatggccgaagaccgcgccctcttccgcgag
gccatggctcgcatcggcctcgaaacgccgaagtccatgctggccaacgccactgaaatc
aaggacgccgaccgcaagaagcacgaagctgcccgcgccgaactcaaggcgaagctttcc
ggtgcggaactggacaaggcgctggacgatctggaaaaccagtggaaccttggcgagacc
gaccgcaagcagcgttacatggcgcatgcgattgcaatcgccgcccaggcgatcgaccat
gtcggcctgccagccatcatccgcccatccttcacgctcggcggcaccggcggcggcatt
gcctataaccgctccgaattcttcgacatcgtctcgggcggcctcgacgcttcgccgacc
accgaggtgctggtcgaagaatcggttctcggctggaaggaatatgagatggaagtggtc
cgcgacaccgcggacaattgcatcatcatctgctccatcgaaaacatcgatccgatgggc
gtccacacgggcgactcgatcacggttgcgccagcactgacgctgaccgacaaggaatac
cagatcatgcgcaacgcctcgatcgcggtgctgcgcgagatcggcgtggaaaccggcggc
tcgaacgtgcagttcgccgtcaacccgaaggacggccgcctcgtcgtcatcgaaatgaac
ccgcgcgtttcgcgctcttcggctctcgcttccaaggcgaccggcttcccgatcgccaag
atcgccgccaagctcgccatcggttatacgctggacgagctggaaaacgacatcaccggc
ggcgcgacgcctgcctcgttcgaaccgtcgatcgactacgtcgtcaccaagatcccgcgt
ttcgccttcgagaagttcccgggcgcctcgccgatcctcaccaccgccatgaagtcggtc
ggtgaagtcatggccatcggccgcaccttcgcagaatcgctgcaaaaggcgctgcgcggc
atggaaaccggcctcaccggtctcgatgaaatcgaaatccccggctttgaagagggcgaa
ggctccaagaacgccatccgcgccgccatcggcacaccgacgccggatcgcctgcgcatg
gtcgcccaggcgctgcgcatgggaatgacggaagaggaagtccacgaaaactcgaagatc
gatccctggttcatcgcccagttcaaggcaattgtggacatggaagcccgtgtccgtgag
caaggcctgccgcaggacgcagagaacctgcgcatgctcaaagccatgggcttttccgac
gcccgcctggcaattctgacgggcaagcgcccgaaggaagtggccgagctgcgcaacagc
ctcaatgttcgcccggtcttcaagcgcatcgatacctgcgcggcagaattcgcctcgccc
accgcctacatgtattcaacctatgaaatccccttcgtcggcgccgcccgctctgaagcg
caggtttccgaccgcaagaaggtcgtcatcctcggcggcggtccgaaccgtatcggccag
ggcatcgagttcgactattgctgctgccatgctgccttcgcgctgaaggatgcaggcttc
gaagcgatcatgatcaactgcaacccggaaacggtttcgaccgactacgacacctccgac
cgcctctatttcgaaccgctgacggccgaagacgtgatcgagatcatgcgcgccgaacag
gaaaagggcgaactggtcggcgtcatcgtgcagttcggcggccagacgccgctgaagctg
gccgaagcgctggaaaagaacggtattccgatcctcggcaccgcgcctgacatgatcgac
cttgccgaagaccgcgaccgcttccagaagctgctgatgaagctcgacctcgcccagccg
aacaacggcatcgcctattcggttgaacaggcgcgcctcgtcgcttcggaaatcggcttc
ccgctggtcgtgcgtccgtcctatgttctgggtggccgcgccatgcagatcatccattcg
gaaggccagctccagacctatctgctcgacacggttccgggcctcgtgccagaggacatc
aagcagcgttacccgaacgacaagaccggccagatcaacaccctgctcggcaagaacccg
cttctgttcgatagctacctgaccaacgccgtcgaagtcgacgtcgatgcactgtgcgac
ggcgaaaacgtcttcgtgtcgggcatcatggagcacatcgaagaagccggtatccactcg
ggcgactcggcctgctcgctgccgtcccgttcgctgagcaaggaaaccctcgacgagctg
gaacgccagacgacggcgcttgcaaaggcgctcaacgtcggtggcctgatgaacgttcag
tacgcgatcaaggacggcacgatctacgttctcgaagtcaacccgcgcgcctcccgcacg
gtgcccttcgttgcaaaaaccatcggtgcgccgatcgccaagatcgctgcccgcgtcatg
gccggcgaaaagcttgatgcggcgattgccgcttacggcaagaaacccgacccgcgcaac
ctgaagcacatcgccgtcaaggaagccgttttccccttcgcccgcttccccggcgtcgac
attctgctcggaccggaaatgcgctcgaccggcgaagtcatcggcctcgacaccgatttc
gcactcgccttcgccaagagccagctcggcgccggcgtcgacctgccgcgctccggcacc
gtcttcgtctcggtgcgcgacgacgacaaggaccgcgtattgcccgcaattcgtattctg
gtcgagagtggcttcagggtactggcaaccggcggcacccagcgtttccttgctgaacag
ggcatcaacgccgagaagatcaacaaggtgcaggaaggtcgtccgcatatcgaagacgcc
atccgcaaccgtcaggtccagctggtcatcaacaccaccgacagcaacaaggcgatttcc
gactcgaagtcgctgcgccgcgcaacgctgatgcagaaggtgccctactacacgacgatg
gccggtgccgaagcagcagcccttgccatcaaggcgcttaaggccggcaatctggaagtg
aagcccttgcagagctacttcctgtaa
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