Agrobacterium tumefaciens H13-3: AGROH133_07823
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Entry
AGROH133_07823 CDS
T01432
Symbol
papS
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGROH133_07823 (papS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agr03019
]
AGROH133_07823 (papS)
Enzymes [BR:
agr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AGROH133_07823 (papS)
Messenger RNA biogenesis [BR:
agr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AGROH133_07823 (papS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ADY65155
LinkDB
All DBs
Position
circular:complement(2171576..2172832)
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AA seq
418 aa
AA seq
DB search
MSSLAGRDWFEKPALKRIFALLNADGGEVRIVGGAVRNALMEQPVVDVDMATTLTPDVVV
ERAKAAGIKAVPTGIEHGTVTLVIDGEGFEVTTLRRDVETNGRHAQVAFGTDWQIDAERR
DLTINALYADEKGEIIDLIDGLPDIETGTVRFIGDAAMRISEDYLRILRFFRFFAHYGSG
RPDADGLRASARAKDRLGTLSAERVWSELKKLLSARDPSRALLWMRQSGVLAEILPETEK
WGIDAIHGLVATEQALGWTVDPMLRLAAIVPPDRERLTALAGRLRLSKAEAAYLAHWASA
PVIDPEMKETALDRLLYRQGVDGVKTRLKLALASARADLSGGEAAMQKVARLSTLLTRAN
KFHKPGFPLSGADVMAAGVESGPKVGEVLKSLEEKWIDVNFSLDRAALTARLKDMLEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccttgccgggcgggactggtttgaaaagccggcgctgaagcgcatcttcgcg
ctgttgaacgccgatggcggcgaggtgcggatcgtcggcggcgccgtgcgcaatgcgctg
atggaacaaccggtcgtcgatgtcgatatggcgacgacgcttacccccgatgtggttgtt
gagcgcgccaaggcggcgggcatcaaggcggtaccgaccggtatagaacacggtacggtg
acgctggtgatcgacggcgaaggttttgaggtgacgacgctgcgccgcgatgtcgagacc
aatggccgccatgcgcaggtcgcttttggcacagactggcagatcgatgccgaacggcgc
gatctcaccatcaacgcactttacgccgacgagaagggcgagatcatcgacctcatcgat
ggccttcccgacattgaaacaggaaccgtgcgcttcatcggcgatgccgcgatgcggatt
tcggaagattatctgcggattcttaggttcttccgcttttttgcccattatggttccggt
cgtcctgatgccgatggcttgcgcgccagtgcgcgggccaaggacaggcttgggacgctc
tcggccgagcgggtgtggagcgagctgaaaaagctgctttccgcgcgcgatccctcccgc
gccttgctgtggatgcggcaatccggcgtgttggcggaaattctccccgaaacggaaaaa
tggggtatcgacgccattcacgggctggttgcaaccgaacaggcgcttggctggacagtt
gacccgatgctgcggcttgctgcgatagtgccgcccgacagggagaggctaacggcgctt
gctgggaggctgcggctgtcgaaggctgaagctgcatatcttgcccactgggcttccgcg
ccggtgatcgatccggagatgaaggagacggcgctcgaccggctgctttaccggcagggt
gttgacggagtgaagacgcggctgaaactggcgcttgcctcggcccgcgccgacctttcg
ggcggtgaggcggcgatgcagaaagtcgcgcggctttcgacgctgctgacgagagcgaac
aagttccacaaacccggctttccgctgagcggcgctgatgtgatggccgcgggcgtggag
tcgggtccgaaggtaggtgaggtgctgaaaagcctcgaagaaaagtggatcgacgtcaat
ttctcgctagaccgggcagcgctgaccgcccggctgaaggatatgctggagaattga
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