Agrobacterium tumefaciens H13-3: AGROH133_07983
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Entry
AGROH133_07983 CDS
T01432
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00230
Purine metabolism
agr01100
Metabolic pathways
agr01120
Microbial metabolism in diverse environments
agr01232
Nucleotide metabolism
Module
agr_M00958
Adenine ribonucleotide degradation, AMP => Urate
agr_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
AGROH133_07983 (xdhB)
Enzymes [BR:
agr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
AGROH133_07983 (xdhB)
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
ADY65211
LinkDB
All DBs
Position
circular:2233303..2235642
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AA seq
779 aa
AA seq
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MDTTSFDKTKTEIDGPVHASLRHDSAHKHVTGSAEYIDDIPEPAGLVHGALGLSDRAHAE
IVSMDLSEVEAAPGVLWVMTGKDVPGENDVSSGGRHDEPLLAETKVEFHGQPIFAVFAES
RDIARKAARKAKIVYKDLPHFTDIDTAIENGGALVIDPMTLKRGDAKLEMDVAPRRLTGT
MRIGGQEHFYLESHIAMAVPGEDDEVTLWSSTQHPSEIQHIVSHILQVPSNAVTVQVRRM
GGGFGGKETQGNQFAALCAIAAKKLNRAVKIRPDRDEDMTATGKRHDFRVDYELGFDEEG
RIHAVDATYAARCGFSSDLSGPVTDRALFHADSSYFYPHVHLTSRPLKTHTVSNTAFRGF
GGPQGMLGAERFIEEIAYAVGKDPLDVRKLNFYGETGSGRTTTPYHQEVEDNIIARVVEE
LEASSEYRARRQAIVEFNKTSPIIRKGIALTPVKFGISFTMTAFNQAGALVHIYNDGSIH
LNHGGTEMGQGLYTKVAQVVADAFQVDIGRVKITATTTGKVPNTSATAASSGTDLNGMAA
YDAARQIRERLIKFAAENWNVPEEEVVFLPNRVRIGLEEIAFNDFIKRAYFARVQLSAAG
FYKTPKIHWDRAAGRGTPFYYFAYGAACSEVSIDTLTGEYMMDRTDILHDVGKSLNPAID
IGQVEGAFVQGMGWLTTEELWWDGKGRLRTHAPSTYKIPLASDRPKIFNVQLAEWSENAE
PTIGRSKAVGEPPFMLAISVLEALSMAVASIADYKVCPRLDAPATPERVLMAVERLKKV
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggacacgacaagcttcgataagaccaagaccgaaatcgacggccctgtacacgcctcg
ctcaggcacgattccgcccataaacatgtgacgggcagcgccgaatatatcgacgatatt
cccgaacccgccggcctcgttcacggtgcgcttggcctttccgaccgggcccatgccgaa
atcgtctcgatggacctttcggaagtggaagctgcgccgggcgtgttatgggtgatgaca
ggcaaagacgtgcccggcgaaaacgacgtctcctccggcgggcgtcatgacgagccgctg
ctggccgaaacgaaggttgaatttcacggccagccgatcttcgcggtcttcgctgaaagc
cgcgatattgcccgcaaggccgcccgcaaggcgaaaatcgtctacaaggacctgccgcat
ttcaccgatatcgacacggcgattgaaaacggcggtgcgctcgtcatcgatccgatgacg
ctgaagcgtggcgatgcgaagctcgaaatggacgtggcaccccgccgcctgaccggcacg
atgcggatcggcgggcaggagcatttttatcttgaaagccacatcgccatggccgtgccg
ggcgaggacgatgaggtgacgctgtggagctccacccagcatccgagcgaaatccagcac
attgtcagccacatccttcaggtgccatccaatgccgtcacggtgcaggtgcggcgcatg
ggcggcggtttcggcggcaaggaaacgcaaggcaaccagttcgcagctctttgcgccatt
gccgccaagaagctgaaccgggccgtgaaaatccgccccgaccgcgacgaagacatgacc
gccaccggcaaacgccacgatttccgcgtcgattacgagctaggcttcgatgaggaaggc
cgcatccacgccgtcgacgccacctatgcggcccgctgcggtttttcctctgacctttcc
ggcccggtcaccgaccgcgcgctcttccatgcggattccagctatttctacccgcatgtg
cacctcacctcgcggccgttgaaaacccacaccgtctccaacaccgcttttcgcggtttc
ggcggcccgcagggcatgctgggggctgagcggttcatcgaggagatcgcctatgccgtc
ggcaaggacccgctcgatgtccgcaagctcaatttctacggcgagaccggttcgggccgc
accacaaccccctatcatcaggaggtcgaggataacatcatcgcccgcgtcgtcgaggaa
ctggaagcatccagcgaataccgcgcgcgcaggcaggcaattgtcgagttcaacaagacc
agcccgatcatccgcaagggcattgcgctcacccctgtcaaattcggcatctccttcacc
atgaccgccttcaatcaggcgggcgcgctggtgcatatctataatgacggttcgatccac
ctgaaccatggcggcaccgaaatgggccagggcctctacaccaaggtggcgcaggtggtg
gccgatgccttccaggtggatattggccgggtgaaaatcaccgccacgaccacgggcaag
gtgcccaatacgtcggccacggccgcctcgtccggtacggacctcaatggcatggcggcc
tatgacgctgcccgccagatccgtgaaaggcttatcaaattcgctgccgagaactggaac
gtgccggaagaagaggttgtcttcctgccaaaccgggtgcgcatcgggcttgaggaaatc
gccttcaacgatttcatcaaacgagcctatttcgcccgcgtccagctttccgccgccggt
ttttacaagacgccaaaaatccattgggatcgtgccgcaggccgcggcacgccgttttat
tatttcgcctatggcgcggcctgttcggaagtgtcgatcgatacactgaccggcgaatac
atgatggaccgcaccgatattctccacgatgtcggcaagtcgctaaacccggccatcgat
atcgggcaggtggaaggcgccttcgtccagggcatgggctggttgacgacggaggaatta
tggtgggacggcaaggggcggctgcgcacccacgctccctccacctacaagatcccgctt
gcctccgaccggccgaagattttcaacgttcaactggcggaatggtcggaaaacgccgag
cccaccatcggccgctccaaggccgtgggcgaaccgcctttcatgctggcgatctcggtt
ctcgaagcactctccatggccgtcgcgtccatcgccgactacaaggtctgcccacgcctc
gatgcgccggcaacgcccgagcgggtgctgatggcggtggaacggttgaagaaggtgtga
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