KEGG   Agrobacterium tumefaciens H13-3: AGROH133_08839
Entry
AGROH133_08839    CDS       T01432                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
agr  Agrobacterium tumefaciens H13-3
Pathway
agr00010  Glycolysis / Gluconeogenesis
agr00020  Citrate cycle (TCA cycle)
agr00260  Glycine, serine and threonine metabolism
agr00280  Valine, leucine and isoleucine degradation
agr00310  Lysine degradation
agr00380  Tryptophan metabolism
agr00620  Pyruvate metabolism
agr00630  Glyoxylate and dicarboxylate metabolism
agr00640  Propanoate metabolism
agr00670  One carbon pool by folate
agr00785  Lipoic acid metabolism
agr01100  Metabolic pathways
agr01110  Biosynthesis of secondary metabolites
agr01120  Microbial metabolism in diverse environments
agr01200  Carbon metabolism
agr01210  2-Oxocarboxylic acid metabolism
agr01240  Biosynthesis of cofactors
Module
agr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
agr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
agr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:agr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AGROH133_08839 (lpdA)
   00020 Citrate cycle (TCA cycle)
    AGROH133_08839 (lpdA)
   00620 Pyruvate metabolism
    AGROH133_08839 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    AGROH133_08839 (lpdA)
   00640 Propanoate metabolism
    AGROH133_08839 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AGROH133_08839 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    AGROH133_08839 (lpdA)
   00310 Lysine degradation
    AGROH133_08839 (lpdA)
   00380 Tryptophan metabolism
    AGROH133_08839 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AGROH133_08839 (lpdA)
   00670 One carbon pool by folate
    AGROH133_08839 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:agr04147]
    AGROH133_08839 (lpdA)
Enzymes [BR:agr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AGROH133_08839 (lpdA)
Exosome [BR:agr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AGROH133_08839 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_oxidored FAD_binding_2 GIDA HI0933_like Lys_Orn_oxgnase Thi4 AlaDh_PNT_C DAO FAD_binding_3 3HCDH_N
Other DBs
NCBI-ProteinID: ADY65545
LinkDB
Position
circular:complement(2595576..2596982)
AA seq 468 aa
MAYDVVVIGTGPGGYVCAVKAAQLGLKVAVIEKRATYGGTCLNVGCIPSKALLHASETFA
HVAHGVDTLGIEVAPPKLNLEKMMGHKDSVVKANVDGVAFLFKKNKIDAFQGTGKVVSAG
KVSVTNDKGESQEIEAKNIVIATGSDVAGIPGVQVDIDESVIVSSTGAIALSKVPEKLIV
VGGGVIGLELGSVWSRLGAKVTVVEYLDTILGGMDSEVSKQAQRLLAKQGLDFKLGAKVT
GVEKTGTGAKVVFEPVKGGAAETLEANVVLISTGRKPYTEGLGLAEAGVVLDSRGRVEID
GHFKTNVDGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQRGHVNYDVIPAVVYTQPEVA
SVGKTEEELKAAGVAYKVGKFPFTANGRARAMQVTDGFVKILADKETDRVLGGHIVGFGA
GEMIHEITVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFFKPIHM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggcatatgatgtagtggtaatcggtacgggtcccggcggttatgtttgcgcggtcaag
gcggcacagcttggcttgaaggtcgcagtgatcgaaaagcgcgcgacctatggcggcacc
tgcctcaatgtcggctgcattccttccaaggcattgctgcacgcttccgaaaccttcgcg
catgtggcccatggcgttgatacgcttggtatcgaagtcgcccctccgaagctgaacctc
gagaagatgatggggcacaaggacagcgtggtgaaagccaatgtcgacggcgttgccttc
ctgttcaagaagaacaagatcgatgccttccagggcacgggcaaggttgtatccgccggc
aaggtctccgtcaccaacgacaagggcgagagccaggaaatcgaagccaagaacatcgtc
atcgccaccggttctgatgttgctggtattcccggcgtccaggtggatatcgatgaaagc
gtcatcgtttcctccaccggcgcgattgcgctctccaaggttccggaaaagctcatcgtg
gtgggcggcggtgtcatcggccttgagcttggttcggtctggtcgcgtcttggcgcgaag
gtcaccgtcgtcgaatatctcgacactattctcggcggcatggacagcgaagtctccaag
caggctcagcgtttgctcgccaagcagggtctcgatttcaagctcggtgccaaggtgacg
ggcgttgaaaagacgggaaccggcgcaaaggtggtgttcgagccggtcaagggtggtgcg
gctgaaacgctggaagccaacgttgtgctgatctccaccggtcgcaagccctacaccgag
ggtctcggtcttgcggaagccggtgtcgtgctcgacagccgcggccgtgtcgaaatcgac
ggccacttcaagaccaatgtggatggcatctacgccatcggcgacgtggtgaagggcccg
atgctggcacataaggcggaagacgagggcgtcgctcttgcggaaattctcgccggccag
cgcggccatgtgaactacgatgtcattccggccgtggtctatacgcagccggaagtcgct
tccgtcggcaagacggaagaagaactgaaggccgctggtgtcgcctacaaggtcggcaag
ttccccttcaccgccaatggtcgcgcccgcgccatgcaggtgactgatgggttcgtgaag
atcctcgctgacaaggaaaccgaccgggttctcggcggccatatcgttggtttcggcgct
ggcgaaatgatccacgagatcaccgtgctgatggaattcggtggttcctcggaagatctc
ggccgcacctgccatgcgcatccgaccatgtcggaagcggtgaaggaagcggcgctggca
actttcttcaagccgatccatatgtga

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