Agrobacterium tumefaciens H13-3: AGROH133_08839
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Entry
AGROH133_08839 CDS
T01432
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00010
Glycolysis / Gluconeogenesis
agr00020
Citrate cycle (TCA cycle)
agr00260
Glycine, serine and threonine metabolism
agr00280
Valine, leucine and isoleucine degradation
agr00310
Lysine degradation
agr00380
Tryptophan metabolism
agr00620
Pyruvate metabolism
agr00630
Glyoxylate and dicarboxylate metabolism
agr00640
Propanoate metabolism
agr00670
One carbon pool by folate
agr00785
Lipoic acid metabolism
agr01100
Metabolic pathways
agr01110
Biosynthesis of secondary metabolites
agr01120
Microbial metabolism in diverse environments
agr01200
Carbon metabolism
agr01210
2-Oxocarboxylic acid metabolism
agr01240
Biosynthesis of cofactors
Module
agr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
agr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
AGROH133_08839 (lpdA)
00020 Citrate cycle (TCA cycle)
AGROH133_08839 (lpdA)
00620 Pyruvate metabolism
AGROH133_08839 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
AGROH133_08839 (lpdA)
00640 Propanoate metabolism
AGROH133_08839 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AGROH133_08839 (lpdA)
00280 Valine, leucine and isoleucine degradation
AGROH133_08839 (lpdA)
00310 Lysine degradation
AGROH133_08839 (lpdA)
00380 Tryptophan metabolism
AGROH133_08839 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AGROH133_08839 (lpdA)
00670 One carbon pool by folate
AGROH133_08839 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agr04147
]
AGROH133_08839 (lpdA)
Enzymes [BR:
agr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
AGROH133_08839 (lpdA)
Exosome [BR:
agr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
AGROH133_08839 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_oxidored
FAD_binding_2
GIDA
HI0933_like
Lys_Orn_oxgnase
Thi4
AlaDh_PNT_C
DAO
FAD_binding_3
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ADY65545
LinkDB
All DBs
Position
circular:complement(2595576..2596982)
Genome browser
AA seq
468 aa
AA seq
DB search
MAYDVVVIGTGPGGYVCAVKAAQLGLKVAVIEKRATYGGTCLNVGCIPSKALLHASETFA
HVAHGVDTLGIEVAPPKLNLEKMMGHKDSVVKANVDGVAFLFKKNKIDAFQGTGKVVSAG
KVSVTNDKGESQEIEAKNIVIATGSDVAGIPGVQVDIDESVIVSSTGAIALSKVPEKLIV
VGGGVIGLELGSVWSRLGAKVTVVEYLDTILGGMDSEVSKQAQRLLAKQGLDFKLGAKVT
GVEKTGTGAKVVFEPVKGGAAETLEANVVLISTGRKPYTEGLGLAEAGVVLDSRGRVEID
GHFKTNVDGIYAIGDVVKGPMLAHKAEDEGVALAEILAGQRGHVNYDVIPAVVYTQPEVA
SVGKTEEELKAAGVAYKVGKFPFTANGRARAMQVTDGFVKILADKETDRVLGGHIVGFGA
GEMIHEITVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFFKPIHM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgatgtagtggtaatcggtacgggtcccggcggttatgtttgcgcggtcaag
gcggcacagcttggcttgaaggtcgcagtgatcgaaaagcgcgcgacctatggcggcacc
tgcctcaatgtcggctgcattccttccaaggcattgctgcacgcttccgaaaccttcgcg
catgtggcccatggcgttgatacgcttggtatcgaagtcgcccctccgaagctgaacctc
gagaagatgatggggcacaaggacagcgtggtgaaagccaatgtcgacggcgttgccttc
ctgttcaagaagaacaagatcgatgccttccagggcacgggcaaggttgtatccgccggc
aaggtctccgtcaccaacgacaagggcgagagccaggaaatcgaagccaagaacatcgtc
atcgccaccggttctgatgttgctggtattcccggcgtccaggtggatatcgatgaaagc
gtcatcgtttcctccaccggcgcgattgcgctctccaaggttccggaaaagctcatcgtg
gtgggcggcggtgtcatcggccttgagcttggttcggtctggtcgcgtcttggcgcgaag
gtcaccgtcgtcgaatatctcgacactattctcggcggcatggacagcgaagtctccaag
caggctcagcgtttgctcgccaagcagggtctcgatttcaagctcggtgccaaggtgacg
ggcgttgaaaagacgggaaccggcgcaaaggtggtgttcgagccggtcaagggtggtgcg
gctgaaacgctggaagccaacgttgtgctgatctccaccggtcgcaagccctacaccgag
ggtctcggtcttgcggaagccggtgtcgtgctcgacagccgcggccgtgtcgaaatcgac
ggccacttcaagaccaatgtggatggcatctacgccatcggcgacgtggtgaagggcccg
atgctggcacataaggcggaagacgagggcgtcgctcttgcggaaattctcgccggccag
cgcggccatgtgaactacgatgtcattccggccgtggtctatacgcagccggaagtcgct
tccgtcggcaagacggaagaagaactgaaggccgctggtgtcgcctacaaggtcggcaag
ttccccttcaccgccaatggtcgcgcccgcgccatgcaggtgactgatgggttcgtgaag
atcctcgctgacaaggaaaccgaccgggttctcggcggccatatcgttggtttcggcgct
ggcgaaatgatccacgagatcaccgtgctgatggaattcggtggttcctcggaagatctc
ggccgcacctgccatgcgcatccgaccatgtcggaagcggtgaaggaagcggcgctggca
actttcttcaagccgatccatatgtga
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