Agrobacterium tumefaciens H13-3: AGROH133_08859
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Entry
AGROH133_08859 CDS
T01432
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00020
Citrate cycle (TCA cycle)
agr00190
Oxidative phosphorylation
agr00650
Butanoate metabolism
agr00720
Other carbon fixation pathways
agr01100
Metabolic pathways
agr01110
Biosynthesis of secondary metabolites
agr01120
Microbial metabolism in diverse environments
agr01200
Carbon metabolism
Module
agr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
agr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
agr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AGROH133_08859 (sdhA)
00650 Butanoate metabolism
AGROH133_08859 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
AGROH133_08859 (sdhA)
00720 Other carbon fixation pathways
AGROH133_08859 (sdhA)
Enzymes [BR:
agr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AGROH133_08859 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
HI0933_like
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ADY65556
LinkDB
All DBs
Position
circular:complement(2608825..2610666)
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AA seq
613 aa
AA seq
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MASISSPSQNGKAYTYVDHSYDVIVVGAGGAGLRATLGMAEQGFRTACITKVFPTRSHTV
AAQGGIAASLTNMTPDCWQWHLYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYGVPFS
RNAEGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQSLRNNAEFFIEYFA
LDLIMAPDGRCTGVVAWNLDDGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGDGGGMI
ARAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASR
DVVSRCMTMEIREGRGVGKNKDHIFLHLDHLDPAILHERLPGISESAKIFAGVDVTREPI
PVLPTVHYNMGGIPTNYWGEVLNANAENPERIAPGLMAVGEAGCASVHGANRLGSNSLID
LVVFGRAAAIRAAQVIDRDAPVPALDTAACDKIMDRFDSLRYANGSTPTAVLRDKMQRAM
QDDAAVFRTQESLESGCQRISAIWKELPDVKVTDRSMVWNSDLVETLELHNLMANAITTV
YGAEARKESRGSHAREDFVDGPFGGRDDVNWRKHTLAWVSPEGDVKLDYRPVHTDLIADG
IDPKKIEPKARVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatcagttcaccttcccagaatggcaaggcttacacctacgtcgatcactcc
tatgacgtgatcgtggtgggcgccggcggcgcgggtctgcgcgcaacgctcggcatggcg
gaacaggggttccgcacggcctgcatcaccaaggttttcccgacgcgctcccacacggtc
gcggcgcagggcggtatcgccgcttctctcaccaacatgacgcccgactgttggcagtgg
cacctttacgacaccgtaaaaggctccgactggctgggcgacgtcgacgcgatgcaatat
ctcgccatggaagcgccaaaggcggtctatgagctggagcattacggcgtgcccttctcg
cgtaatgccgaaggcaagatctaccagcgcccgtttggcggccatatgcagaactatggc
gaaggcccgccggtgcagcgcacctgtgccgctgccgaccgtaccggccacgccattctg
cacacgctttacggccagtcgctgcgcaacaatgcggaattcttcatcgaatatttcgcg
ctcgacctcattatggcgcccgatggccgctgcacgggcgtcgtggcgtggaacctcgat
gacggcacgatccatcgcttctccgccaagatggtggtgctggcgaccggtggttacggc
cgcgcctatttctcggcaacgtctgcccatacctgcaccggcgacggcggcggtatgatt
gcacgtgccggcctgccgcttcaggatatggaattcgttcagttccacccgaccggcatt
tacggcgcgggctgcctgatcaccgaaggcgcgcgcggcgagggcggttatctcgtcaac
tccgaaggcgagcgcttcatggagcgttatgctccttcggcgaaggaccttgcttcgcgt
gacgtggtgtctcgctgcatgaccatggaaatccgcgagggtcgtggcgtcggcaagaac
aaggaccacatcttcctgcatctcgatcaccttgatccggcgatcctgcacgagcgtctt
ccgggcatttccgaaagcgccaagattttcgccggcgttgacgtgacgcgcgagccgatc
ccggtcctgccgaccgttcactacaatatgggcggcattccgaccaactattggggcgaa
gtgctgaacgccaacgccgagaacccggaacgcatcgctcccggcctgatggccgttggc
gaagccggttgcgcctcggttcacggcgcgaaccgtctcggctccaactcgctgatcgac
cttgtggtcttcggccgcgctgccgccatccgtgcagcccaggtcatcgaccgcgatgcg
ccggttccggctctcgacacggctgcctgcgacaagatcatggatcgcttcgacagcctg
cgttatgccaacggctcgacgccgacggcggtgctgcgtgacaagatgcagcgcgccatg
caggacgatgccgccgtattccgcacacaggaatcgctggaaagcggttgccagcgcatt
tccgccatctggaaggaactgcctgacgtcaaggttaccgaccggtcgatggtctggaac
tccgatctggtggaaacgctcgagctgcacaatctgatggccaacgccatcaccacggtc
tatggcgcggaagcgcgcaaggaaagccgcggttcgcatgcccgcgaggatttcgtcgat
ggtccgttcggcggtcgcgacgacgtgaactggcgcaagcacacgcttgcctgggtcagc
cctgaaggtgatgtcaagctcgactaccgccctgttcacaccgacctgatcgccgacggc
atcgatccgaaaaagatcgagccgaaggctcgcgtctactga
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