KEGG   Agrobacterium tumefaciens H13-3: AGROH133_09374
Entry
AGROH133_09374    CDS       T01432                                 
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit
  KO
K11907  type VI secretion system protein VasG
Organism
agr  Agrobacterium tumefaciens H13-3
Pathway
agr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:agr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AGROH133_09374
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:agr02044]
    AGROH133_09374
Secretion system [BR:agr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AGROH133_09374
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 NBD_SMAX1 Sigma54_activat TniB AAA_25 Zeta_toxin Clp_N NACHT nSTAND3 SLFN-g3_helicase IstB_IS21 SRP54 Torsin
Other DBs
NCBI-ProteinID: ADY65791
LinkDB
Position
linear:complement(39434..42103)
AA seq 889 aa
MSHIDLNRLVGALEPVLRVTLEAAASVAVRMGHRYVDIPHWLLAVVDSGIYAKTFEELKI
PLPVLQAEISRSLEESIIGDGEALSLSQNILTAAREAWILASLEAGRDRVTLCDLLLAMD
EETSLRSFVRSAFPSLKAMDRTALERLRNSTENGAGVDVPSALAGSGQAGTGQSAGQNDF
LRLYTQDMTADARNGKVDPVIGRDDELRQLVDILTRRRQNNPILVGEAGVGKTAVAEALA
LEIASGNVPEKLRNVRLLNLDISLLQAGAGVKGEFERRLHGVIDAVKRSTEPVILFIDEA
HGLVGAGGAAGQGDAANILKPALARGEVRTVAATTWSEYKKYFEKDAALTRRFQPVHVRE
PDETTAIRMLRGVADSFVSHHNVVVRDEAVVAAVQLSARYMPARQLPDKAVSLLDTAAAA
VSLARQTEPERLRAMESERRLLTDELNWLLREPQDGEIDSRIQSIRGEVEKLESGIDDLR
SRYDAEMAELSEEQPVEGDVSNVSPLRPAVEAKPANAERLVPTVVDREAIAAVVSRWTGI
PLGKLLADQIESARTLDARMRQRVVGQDAAIARIADAMRTARAGLSDPRRPPAVFFLVGM
SGTGKTETALSLADMLYGGNSHLTTINMSEFKEEHKVSLLLGSPPGYVGFGEGGVLTEAV
RRRPFGVLLLDEIDKAHPGVQDIFYQVFDKGVLRDGEGRDVDFKNTTIFMTANTGSELLS
ALSADPDTMPEGEALEALLMPELTKQFKPAFLGRTIILPFMPLGTEALARIVDMQIGKIR
ERVLATYGTGLTLSNVARDALVARAGASEIGARAIEIMIGKDLLPPLSSFFLEKVIAGER
VGNIVVDFGENGFGIRAEEAGEADEFAVTEEVGVDKVAASDGATRRMRH
NT seq 2670 nt   +upstreamnt  +downstreamnt
atgtcgcatatcgatctcaaccgccttgttggagcgcttgagccagtcctgcgtgttacc
cttgaagctgcggcttctgttgcggtgcgcatggggcacagatacgtggatatcccgcat
tggctgcttgcggttgtggactccggcatctatgcgaaaacattcgaggaattaaaaatt
ccacttccggtattgcaggctgaaatcagccgcagtctggaggagtccatcatcggcgac
ggagaggcattgtcgctctcccagaacatcctcacggcagcccgggaggcatggattctc
gcatcgctggaggctggccgcgaccgtgttacgctttgcgatcttctgttggcgatggat
gaggaaacctcacttcgctctttcgtccgctcggcatttccttctctcaaggcgatggat
cgcaccgcgcttgagcgtcttcgcaactcgactgaaaatggcgcaggcgtggatgttcct
tccgcgctggcaggctcagggcaggcagggacaggacagtctgcaggccagaatgatttc
ttgcgcctttacacccaggacatgaccgcagatgcccgcaatggcaaggttgatcctgtt
atcggccgcgatgatgagttacgccagctcgttgatattctaacgcgccgccgacagaac
aatcccatcctggtaggtgaggcgggggttggcaaaacggcggttgccgaggcgctggcg
ctggaaatcgcgtctggcaacgttccggaaaagttgcgcaatgtccgcctgctgaacctc
gatatttcgctacttcaggccggtgccggcgttaagggtgagtttgagcgccgccttcat
ggcgtaatcgatgcggtcaaacgttctaccgaaccggtcatcctgtttatcgatgaggcc
cacggtctcgttggtgcgggtggtgcggccgggcagggcgatgcggccaatattctcaag
cccgctctggcgcggggtgaagtgcgcaccgtcgcggcgacgacctggagcgaatacaag
aagtatttcgaaaaggatgcggcgctgacccgtcgtttccagcctgtacatgtgcgcgag
ccggatgagacgaccgccatacgtatgttgcgcggtgtcgctgacagcttcgtcagccat
cacaacgttgtcgttcgtgacgaggcggtcgtggccgcggtgcaattatccgcacgctac
atgcccgcgcggcagttgccggacaaggccgtcagccttctcgatacggccgcggctgcc
gtctcactggcacggcagaccgagccggagcggctgcgcgctatggaaagcgagcggcgc
cttctcaccgatgagttgaactggcttctgcgtgaaccgcaggatggcgagattgacagc
cgtatccagtcgatacggggcgaagtcgaaaagcttgagagtgggatcgatgatctgcgc
agccgttacgacgcggagatggctgagctaagcgaagagcagccggttgaaggcgatgtt
tccaatgtctctcccctgcggcctgcggttgaggcaaaaccggcaaatgccgagagactt
gtcccgacggtcgttgatcgtgaggcgatcgccgccgtcgtttcgcgatggaccggaatt
ccacttggcaaacttctggcggaccagatcgaaagtgcccggacactcgatgcgcgtatg
cggcagcgggtggtggggcaggatgctgcaattgcacggattgccgatgccatgcgcact
gcgcgggccggattatccgatccgcgccgcccgccggccgtttttttccttgttggcatg
tccggaacaggaaagaccgaaaccgcgctgtcgctcgccgatatgctctacggcggcaac
agccatttgacgacgatcaacatgtcggagttcaaggaagagcataaggtttcgctgctt
ctcggttcgccgcccggctatgtcggtttcggcgaaggcggcgtgttgacggaagcggtg
cgccgtcggccgttcggcgttctgctcttggatgagatcgacaaggctcaccccggcgtc
caggacattttctatcaggtgtttgacaagggcgtgttgcgtgatggcgaaggccgcgac
gtggatttcaagaacaccactatcttcatgacggccaatacaggctcggagttgctctcg
gcgctgtcggccgatcccgacacgatgccggaaggcgaagcgctggaagcgcttctgatg
ccggagcttaccaaacagttcaagcccgcgttcctcgggcgcacgatcattcttcccttc
atgccgcttggtacggaggcgcttgcaaggatcgtggatatgcagattggcaagatcagg
gaacgtgtgctcgcaacatatggcaccggcctgaccctgtccaatgtggcgcgagatgcc
ttggtggcgcgcgccggtgcaagtgagattggcgcacgcgccattgaaatcatgatcggc
aaggacctcctgccgcctctttccagctttttcctcgaaaaggtaatcgcgggagagcgt
gtcgggaacattgttgtcgattttggtgaaaacgggttcggcattcgtgccgaagaggct
ggggaagcagatgaattcgccgtaaccgaagaggttggggtggataaagttgccgcgtcg
gatggggctacccgacgcatgcggcattaa

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