Agrobacterium tumefaciens H13-3: AGROH133_09431
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Entry
AGROH133_09431 CDS
T01432
Name
(GenBank) hemagglutinin
Organism
agr
Agrobacterium tumefaciens H13-3
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Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Big_9
Big_3_5
Ig_SIBA-E_2nd
Cadherin_5
fn3
DUF7507
DUF7601
K319L-like_PKD
Y_Y_Y
Ig_DSCAM-DSCAML_C
LtfC
Motif
Other DBs
NCBI-ProteinID:
ADY65829
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Position
linear:82105..86592
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AA seq
1495 aa
AA seq
DB search
MGGRLSSWKDAAGRAVSCLHTISRTGAIALSLLLVLATQALAQSVTVSAVPATFNGLGDN
IRFDYVIDPGSYTITSINPTTTSIKGAVVSCPSVGSGLEWPNKLTCTAAYRVDELDVMAG
QFSDFASFSGTRVGGHSFSFTSNTLVVRAVAGGPVVLSVTSSPNPSLPGQEVEVTATVSS
MGCNAGQSPPGSVSISIGSQSANLGLAPTGPVSPASSATFRTTSLSSGTYPVSASYTGGS
GCSTSSASGSNHTVETKPTVTINQATAQADPTSRSPILFDVAFDKPIVGFSGADVQLSGT
AGATTATISGSGPTYQVAVSGMNRAGTVVATIPAGSVTTPAGLANEASTSSDNSVSYDPV
KITPVAIADPAYQQVYGPVGLTASGGSAPHSFAVSAGTLPGGLSLSSNGELTGIPTQTGN
FSFTVTATDSDGATGEQSYSVSIAAPVIDISPTSIPNATYDIAYNQTLTASGGASPHSFS
VSTGSLPPGLSLAGSGELSGTPILSGTYNFTVTASDVNGQTGSRAYSISVAFTLPDAPVG
LMATAGDTQAAVSFQPPPRNGGVAITGYIVTATPADVAPVAGGNSPIVVTGLTNGQSYTF
TVTAENAAGQSVASVQSNSVTPKASQTLTFNNPGPQTFGTTPTLTASSDSGLTPIFTSVT
TGTCTITSSGLLTFVSTGTCTINADQPGDSDYLPASQITRSFTVNPQAPVANAVSVSVAP
DSSDNVIALNVTGGDPASVAIATAPSNGNATATGTMITYTPRPAYTGQDSFTYTATNVSG
VSAPATVTVLVTATTLVFSPSAGRLTDAFVDMPYSQTVTVSGGNAPYQYTSSGALPDGLN
LNSATGEITGNPTTEGNASFNITARDTNGVTASAAYTIAVLVAAPVASDSTVTVVADSTG
NPVPLGISGGRLDTIAVITGPSHGTVSVIGTSVTYTPNSGYSGTDSFTYSARNSSGNSSA
TVTITVTPPAGALALSPAGGALTEAMAGEAYSQSITASGGTNPLLYSLAGGTLPKGMILN
LSTGELTGPLETETEGDYSFTVQVRDARGATAAAAYTLKVKTREINVANREISVAPGATP
PNINLATGATGGPFTGADLTFVSPANAGRASIVNGEFAQAGGTQATGLYLKFIPNPAFSG
QARVGFRLVSALGASNEGTVTYNLGYDAAQVADEINDLVHGFVRARQNIIASTIKVPGLL
ERRQMVNATSAVTSRAMPSGEGMVLSFATSLAQIEAARNNADGVTRTEMPLFNIWLDGSF
LVHNRDESGSKWGSFAMVSAGVDYLLSDKAMLGFSFHFDRMTDPTNGDNELTGNGWLLGP
YASFEIARSVFWDSSLLYGGSANDIDTPFWDGSFDTSRWLFDTSISGRWDINDVTTFTPR
FRGVYLSETIENYTVGNDVGDLIELRGFKEEQLRVSLGAEIARQISLENGSIMTPKFGGT
VGVSGLDGEGAFGSLSTGVTVETAENWSIDAGLLFNIEGDGETSAGARVGVSKKF
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcaggttgagctcgtggaaagacgctgcaggtcgtgcggtgtcctgtcttcat
acgatatccagaacgggcgccatcgctctttcgcttctccttgtcctagcgacacaggcg
cttgcccagtccgtcacggtttcggccgtgcctgcgacgttcaatggccttggcgataac
atccgtttcgattacgttattgatcccggctcctacaccatcaccagcatcaatcccaca
accacgtccatcaagggtgcagtagtatcctgtcccagcgtgggcagcggccttgaatgg
cccaacaagctgacatgtactgcggcttaccgcgtcgacgaattggatgtcatggccggg
cagttttcggatttcgccagtttctccggcacccgggtgggcggacattctttcagcttt
accagcaatacgctcgtcgtacgcgccgtagcaggcgggcctgtcgtcctgtcggtaacg
tcttcgcccaacccatccttgcccggccaagaggtggaagtcacggcaaccgtctcctcc
atgggctgcaatgccggccagtcgcctccggggagcgtcagcatttccatcggttcccaa
tcggccaatctcggtctggcgccgaccgggccggtgagcccggcatcttccgccaccttc
cggacgacgagcctgtcatccggaacatatccagtaagcgcttcctacacaggaggcagt
ggctgcagcacatcttccgcaagcggctccaatcacacggtcgaaaccaaaccgactgtg
acgatcaatcaggcaacagcgcaagcggacccgacgtctcggtcgccgatcctgttcgac
gtcgctttcgacaaacccattgttggtttttccggcgccgatgtgcagctgtccggcacg
gccggcgccaccacggccacgatttctggttccggtcccacctatcaggtggcggtgtcg
ggcatgaaccgggccggaaccgttgttgcaacgatcccagccggaagtgtcacgacaccg
gccggcctcgcaaacgaggcgtcgacgagttcggacaattcggtctcatacgacccggtc
aaaatcacccctgtcgcgattgccgatccagcctatcaacaggtctatggtccggtgggc
ctgaccgcgagcggcggtagtgcgcctcacagctttgcggtctcagcaggcacgctgccc
ggcgggctttctctttccagcaacggtgagctgaccggcattccaactcagaccggcaat
ttcagttttaccgtgacggcaaccgactctgacggtgcgacaggagaacaatcctattcc
gtttccatcgcggcacccgtgatagatataagtcccacttccatccccaatgcgacgtat
gacatagcttacaaccagaccctaacagcctcgggcggtgcatcaccacacagcttctca
gtgagcacgggctcgctgccgccgggcctttcattggctggctccggcgagctttccggc
acgccgatcttgtcgggcacctataacttcacagtcaccgcatccgatgtaaatggccag
acgggcagccgcgcttattccattagtgtcgcattcactctgcccgatgcgccggtgggt
ctgatggcaaccgctggtgacacccaggcggccgtgtccttccagccgccgccacgcaat
ggtggtgtggcgatcacgggttatatcgtgacagcgacccccgcagatgtggcgccggta
gcaggggggaacagccccatcgttgtcacaggcctaaccaacggccaaagctacacgttc
acggttaccgccgaaaatgctgccggtcagagtgtcgcctccgttcaatcaaacagcgtc
actccgaaagcgtcacagacgctcacgttcaacaatccggggccgcagacgtttggaacg
acgcccacgctgacggctagcagcgattccggattgactccgatttttacttccgtcacg
accggcacctgcacaattacaagcagtggccttctgacctttgtttctacaggcacatgt
acgatcaatgcggatcagcccggcgacagcgattatcttcctgcgagccagatcacgcgc
tcgttcaccgtcaatccacaggcacctgtggccaacgcggtctcggtcagtgtcgcacct
gattcgtccgacaacgtcatcgctctcaatgtgacgggtggagacccggccagcgtcgcc
atcgccacggctccgtccaatggcaacgcgacagcaaccggaaccatgatcacctatacg
ccaagaccggcatatacgggtcaggacagtttcacctatacggcaacgaatgtcagcggt
gtgtctgcgcctgcaaccgtcacagttttggtcacggcgacgacactcgtcttctctccc
tccgcaggacggctgacggatgcattcgtcgatatgccctatagccagaccgtcacagta
tcaggcggcaatgcaccctatcaatatacgagcagcggcgcgctgcccgatggcctcaac
ctgaattccgccaccggagagatcacgggcaatccgacgacggaaggaaatgcgagcttc
aatatcaccgcacgcgacaccaacggcgttaccgcttctgctgcctacaccatagctgtc
ctggttgccgcgcctgtcgcaagcgacagcacagtaaccgtcgtcgcagatagtaccggc
aatcccgtacctctcggcatatcgggaggcaggctggacacaatcgctgttatcaccggc
ccatcacacggaactgtcagcgtgatcggcaccagtgttacctacacgccgaacagcggc
tattccggcaccgacagctttacctattcggcgagaaactcttcgggcaattcgtccgcc
acggtcacgatcacagttacaccgccagcgggcgccctcgccctttcacccgcaggcgga
gctttgacggaagcgatggcaggagaagcttacagccagtccatcacggcttccggcggc
accaacccgctgctctacagccttgccggcggtacattgccaaaaggtatgatcctcaat
ctttcaaccggtgaactcacaggtccgctggagaccgaaaccgagggtgactatagcttt
accgttcaggtgcgggacgctcgaggggcaaccgctgcagcagcctatacgctgaaagtg
aagacccgcgaaatcaacgtcgccaaccgggagatcagcgtagcgccgggcgcaacaccg
ccgaatatcaatctcgccacaggcgccacgggcggtcccttcaccggcgccgatctcacc
tttgtcagtcctgccaacgccggtcgggcaagcatcgtgaacggcgaattcgctcaggcc
ggcggtacgcaagcgacgggattgtacctcaaattcatccccaatcccgcattctcgggt
caagcccgggtgggttttcgtctcgtcagtgcactgggtgcctccaacgaggggaccgtc
acctataatctcggttacgatgctgcacaggtggcagacgagataaatgatctcgtgcat
ggatttgtccgcgccagacagaacatcatcgcgtcaacgatcaaggtgccgggccttctt
gaacggcgacagatggtcaacgccaccagtgccgtcacttcacgtgcaatgccttccgga
gagggcatggttctgagtttcgccaccagccttgcgcagatcgaagctgcccgaaacaac
gccgatggcgtgacgagaacggaaatgccgcttttcaacatctggcttgacggctcgttc
ctcgtccacaaccgggatgaatcgggaagcaaatggggcagcttcgccatggtttcagca
ggtgtggactatttgctttccgacaaggcaatgcttggtttttccttccatttcgaccgc
atgacggatccgacgaacggtgacaacgagttgaccggtaacggctggctccttggcccc
tatgcctcgtttgaaatcgccagaagcgttttctgggacagcagcctgctgtatggcggc
tctgcgaacgacatcgatacacccttctgggacggatccttcgataccagccgttggctt
ttcgacacgtcgatctcgggacgctgggacatcaatgacgtcacgaccttcacgcccaga
tttcgaggtgtttatctatccgagactatcgaaaactatacagtcggcaatgacgttggt
gacctgatcgagctgcgcggttttaaggaagagcaactgcgtgtcagcctcggcgccgag
attgcgcgccagatttcccttgaaaacggttccatcatgacaccgaaattcggcggaaca
gttggtgtttcggggctggatggagaaggcgcctttggctccctcagcacgggagtaaca
gttgagactgcggaaaactggtccattgacgccggcctcctttttaacattgaaggcgat
ggggaaacctcggctggcgcaagagtgggtgtcagcaaaaagttttag
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