Agrobacterium tumefaciens H13-3: AGROH133_09758
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Entry
AGROH133_09758 CDS
T01432
Name
(GenBank) hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AGROH133_09758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_09758
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AGROH133_09758
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ADY65956
LinkDB
All DBs
Position
linear:complement(220074..220904)
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AA seq
276 aa
AA seq
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MNRRASWKGHLTFGDFTCEIGLYSALTSSEKISFNIVNRKTGHRVERQYVDSDTGDAVDR
EDQVKGYELDNGDHIVIEGDEIATLMPENDKVIRIKHFLSHDEIDKLYFDKSYYLAPTQE
GGEEALTLLAKAMDDEKVSALGEAVLFRRNRVLLIRPSGKALVATTLNFGYEVRSQTTVF
KSIPDIQFDEEMLELAGHIIGKRAGTFDPAEYTDRYNDALAELVKAKIEGREISKQPPRK
QDNIIDLKEALRRSAGDGDSGKSTAGAGRKSSRKAS
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggagagcgagctggaagggtcatctgacattcggcgatttcacctgtgaaatc
ggtctctattccgcgctcacttcatcggaaaagatctccttcaacatcgtcaaccgaaag
accggccatcgcgtcgaaaggcaatatgtcgatagcgataccggcgacgctgtcgaccgc
gaggatcaggtcaagggatatgaactcgacaatggcgaccatattgtcattgagggagat
gagatcgcaacgctgatgccggaaaacgacaaggtcatccgcatcaagcattttctgagc
cacgacgagatcgacaagctctatttcgataaatcctattatctggcgccgacgcaggag
ggtggcgaagaggctttgacgctgctggcaaaagccatggacgacgagaaggtctcggca
cttggcgaagcggtactctttcgccgaaaccgcgtgctgttgatccgtccaagcggcaag
gcgctcgtggcgacgaccttgaatttcggctacgaggttcgctcgcaaaccaccgttttc
aagtccattccagatattcagttcgatgaagagatgcttgaactcgccggtcacatcatc
gggaaacgggcaggcacattcgatccggcggaatataccgatcgttacaatgatgcgctg
gcggaactggtgaaggcgaagatcgagggcagggaaatcagcaaacagccgccgcgcaag
caagataacatcatcgacttgaaggaggctttgcgccgcagcgccggtgacggcgacagc
ggaaaatctaccgctggtgcggggcgcaaatcctcccggaaagcgagctga
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