Agrobacterium tumefaciens H13-3: AGROH133_10026
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Entry
AGROH133_10026 CDS
T01432
Name
(GenBank) type I secretion system ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02010
ABC transporters
agr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AGROH133_10026
03070 Bacterial secretion system
AGROH133_10026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agr02000
]
AGROH133_10026
02044 Secretion system [BR:
agr02044
]
AGROH133_10026
Transporters [BR:
agr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AGROH133_10026
Secretion system [BR:
agr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
AGROH133_10026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
AAA_21
AAA_22
ABC_ATPase
AAA_29
AAA_16
AAA_18
DUF87
RsgA_GTPase
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ADY66055
LinkDB
All DBs
Position
linear:complement(342305..344509)
Genome browser
AA seq
734 aa
AA seq
DB search
MKQNTAMQGTVDFSNDRKADDTDTSEIKNDSGLIALCAIASHYRIAADPKRLTHELAVPG
RSHSRDILRAAKNIGLKARLIQAKSEKRIVSLPVPAILCFVDGSYGLYLGPASNGMHNIA
DPESLAVRQMDIATLLEAGNGSFILVQRRFAGPGVSKGTFGFRWFLPSLFRYRKAFGHVL
VASLFVQIFALVTPLFFQVVVDKVLAHRSYSTLIVLVIGLVALGLFDVILQYLRTYALSH
TTNRIDVELGQRLFRHMMKLPLSYFETRAAGQTVARIRELETIRDFLTGQGLFSGLDLLF
TGVFIFVLFCYSTTLAWIVVASIPFYIGVGVLIRPFLKERIDEKFDRGAYSQQLLVETVV
GIQTLKASAVEPVVSAQWEERLAAYVRSSFGATMLASKGQNAIQYINRVTSAALLLFGAQ
SVINGELSVGALVAFNMIASQVSQPILRLSQLWQDFQQVQISVSRLADILNAPVEPRPKN
PINLPPPRGALEFRRVNFRYRSDTPNVLNDINVSIRPGEVVGIVGASGSGKSTLTKLIQR
FYVPDSGQVFLDGQDISQSDPAWLRSHIGVVLQENMLFNRTVHDNIAFSNPAMSRDTVIR
MARMSGADEFITKLSRGYDTMIEERGANLSGGQRQRIALARALAINPPLLILDEATSALD
YESERIILQNMRDIVRGRTVIIIAHRLATVRYCNRIIGMKDGAITEHGTHEELLARPDGT
YAHLWNLQSGSVFA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagaatacagccatgcagggtactgtcgattttagtaacgaccgaaaagctgac
gacacagatacttccgaaattaaaaatgatagtggtcttattgcgttgtgcgcaatcgcc
tcacattaccgcatagccgcagaccccaagaggctcacacatgaactcgccgttcccggc
aggtcacattcccgggatattttgagagcggcgaaaaatatcggcctgaaggcgaggctg
atacaggcgaaatcggaaaagcgcattgtttcgttgccggttccggcgatcctgtgcttt
gtcgatggcagctatggcttgtatcttggacctgcaagcaacggcatgcacaacatcgcc
gatcccgaaagtctggcggttcgccagatggatatcgcaacattgctggaggcgggcaac
ggttctttcattctggtgcaacggcggtttgcggggccaggcgtttccaaaggcaccttc
ggtttccgatggtttcttccatccctgtttcggtatcgcaaagcattcggccacgtcctg
gtcgcctcgcttttcgtacagattttcgcactcgtaacgccgttgttttttcaggtcgtg
gtggacaaggtcctcgcccacagaagttattcgaccctcatcgttctggttatcggtctc
gtcgctctcggcctatttgacgttatcctgcaatatctcagaacctatgcgctgtcccac
accactaatcgcatagatgtcgagcttggccagaggctgtttcgtcatatgatgaaattg
cccctgagttatttcgaaacgcgggctgcgggccaaaccgttgcgcgtattcgggagcta
gagaccatccgggattttttgacggggcagggacttttctcgggtctagatctgctcttc
acgggtgtcttcatatttgttctgttttgttattcgacgaccttggcatggatcgtggtt
gcctcgataccgttttacataggggttggcgttctgatccggccatttcttaaagaacgc
atcgatgagaagtttgaccggggcgcctatagccagcaattgctggtggaaaccgtcgtc
ggcatccagacgctgaaggcgtcggcggttgagccggttgtttccgcgcaatgggaagaa
aggctggcggcatatgtgcgttcttccttcggcgcgacaatgcttgcttccaagggtcaa
aacgctattcaatatatcaacagggtcacaagtgcggctttgctgctgtttggggcgcaa
tccgttatcaatggcgaattgagtgtcggagcgctagttgcgtttaatatgattgccagc
caggtgtcacagcccatcctgcgcctctcgcaattatggcaggattttcagcaggtacag
atatcggtttcgaggcttgcggatattttaaacgcccccgtggaaccgagacccaaaaac
cctatcaacctgccgccgcctcggggcgcattggagttcagacgggtcaatttccgctat
cggtcagatacgccgaacgtcttgaatgatatcaatgtctccatccggccgggtgaagtc
gtgggaatcgtcggggcctccggttcaggaaaatccaccctcacaaagcttattcagcgt
ttctatgtgcctgacagcggtcaggtatttctggacgggcaggatatctctcaaagcgac
cccgcctggctgagaagtcatattggtgtggtgttacaggagaacatgctgttcaaccgc
accgtgcatgacaatatagctttcagtaacccggcaatgtcccgcgacaccgtaatccga
atggcgcgaatgtccggtgcggacgagtttattacgaagctgtctcgtggctacgatacg
atgatcgaagaacgtggtgcaaatctctcgggcggtcagcggcaaaggatagctctggct
cgtgctctggcaatcaatccgcctttacttattctggatgaggcgacgagcgcattggac
tatgaaagcgagcggattattctccagaacatgcgtgatatcgttcgcggacgaacagtc
attatcatcgctcacagactggcgactgttcgctactgcaatcgcatcataggcatgaaa
gacggcgccatcaccgagcatgggacacacgaggagctgctcgctcgacccgatgggacc
tatgcgcacctctggaaccttcaaagtggaagtgttttcgcgtga
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