Agrobacterium tumefaciens H13-3: AGROH133_10453
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Entry
AGROH133_10453 CDS
T01432
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03030
DNA replication
agr03430
Mismatch repair
agr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGROH133_10453
03430 Mismatch repair
AGROH133_10453
03440 Homologous recombination
AGROH133_10453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agr03032
]
AGROH133_10453
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_10453
Enzymes [BR:
agr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AGROH133_10453
DNA replication proteins [BR:
agr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AGROH133_10453
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AGROH133_10453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
T4_MRH
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ADY66216
LinkDB
All DBs
Position
linear:complement(532175..533155)
Genome browser
AA seq
326 aa
AA seq
DB search
MTSQLDFFASATARLPQAERGRKAGGRETTLKSVPDDEALVGYLESTGNYRVLRKLQPRA
ICEQPRPGFPRQGVILDTETTGLNHRTDEIIEIGVITFTFDDQGTIGDVTGVYGGLRQPG
TSIPEEITRLTGITDEMVAGQTIDIDRLTSLVEGADLIIAHNAGFDRPFCEAFSPIFRNK
AWACSVSEVDWSGRGFEGSKLAYLIGQSGYFHDGHRAVDDCFALLEVLEQVRAGQSGTPF
MELHEASQHSRVRIYAENSPFDMKDHLKKRGYRWSDGSDGRPKSWWVELAEEKLEEELHF
LRTEIYRWDADPTVKYLTAFDRFKAG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccagttggattttttcgcttccgcgacggcgcggcttcctcaggctgagcgc
gggcgaaaagcgggtggtcgcgaaacgacgctgaaatcggttcctgatgatgaggccttg
gtcggatatctcgaatccacaggcaattaccgcgtcctgcgcaagttgcagccgcgcgcg
atatgcgagcagccgcgaccggggtttccacgtcagggcgtgatcctcgacaccgagacc
acgggcctcaaccaccgaactgacgagatcatcgaaatcggcgtcattaccttcacattc
gacgatcagggcacgatcggcgatgtcaccggggtctatggcggtctgcgacagccgggc
acttccatcccggaagaaatcacgcgcctgacgggtatcaccgatgaaatggttgccgga
cagacgatagacatcgaccggctgacctccctggttgaaggtgctgatctgatcattgcc
cacaatgccggcttcgatcgtccgttttgcgaggccttctcgccgatcttccgcaataag
gcctgggcctgctccgtctctgaggttgactggagtggtcggggttttgagggcagcaag
ctcgcctacctcatcgggcaatccggctatttccatgacggccaccgagcagtcgacgat
tgtttcgctctgctggaggtgctggaacaggtacgcgccggccaaagcgggacgcccttc
atggaactccatgaagccagccagcactcccgggttcgcatttacgcggagaacagcccg
ttcgacatgaaggatcatctgaaaaagcggggctatcgctggtctgatggttccgatggc
cggccgaaatcctggtgggtggaactggcggaggaaaagctcgaagaagagctgcatttc
ctccgaaccgaaatttaccgctgggacgccgatcccacggtcaagtatctgacggcattt
gaccggttcaaagccggttag
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