Agrobacterium tumefaciens H13-3: AGROH133_10456
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Entry
AGROH133_10456 CDS
T01432
Name
(GenBank) acetoin catabolism regulatory protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agr03000
]
AGROH133_10456
Transcription factors [BR:
agr03000
]
Prokaryotic type
Helix-turn-helix
Other families
AGROH133_10456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
AAA_5
HTH_30
HTH_AsnC-type
HTH_24
AAA
HTH_23
Mg_chelatase
HTH_38
HTH_11
HTH_IclR
HTH_29
AAA_2
AAA_16
HTH_Tnp_ISL3
Zeta_toxin
MarR_2
HVO_A0261_N
HTH_28
IclR_C
HTH_psq
TIP49
Motif
Other DBs
NCBI-ProteinID:
ADY66219
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Position
linear:complement(536471..538345)
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AA seq
624 aa
AA seq
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MVSTLSHIREIERVGMGAVSPRDTPVIQSWLRCLNDYKLDPTIAQEAYIVPELKLREHRE
QAEELIRIGRSGLEALFNQIAEQNYVLLLSDARGVTVDFMGDPTFDNQLRRAGLYLGSEW
SENRAGTCAVGACLVSGEPVIIHQDDHFDTSHIGLTCTAAPVFDTLGDLTAVLDISQLRS
PTAKASQQLALHLVASTARRIELANLMTRTRNDWVLRLARSPEFLDVDPDAAIALDGSGR
ITGMTHGGFGALARSMNMHGLATRDFLGQPISSVFDIDVDDLPRFMRGRPNGERLLRARN
GLVLFASAIAPAVSIRAPVTPEPRLPRALRDMSNGDPAMEKVQARAAKLAARDIPILIQG
ETGSGKEYLARAIHDSCNSDGNFVAVNCAAIPEHLIESELFGYTPGAFTGASQKGKRGLI
EEASGGTLFLDEIGDMPLSLQSRLLRVLSENEVQPVGALKAKPVRLRVLSASHRDLAELV
KEGRFRQDLYYRLNAATVTLPALREREDLGWLIDQFLRRIEKENGETYRIDKAARAILLD
HDWPGNLRELFNALRVAAALSDGGKIDPGCLPEHLFAEVATDDALRDDDDLRRALKDCGN
NVSALARSLGVNRSTIHRRLKRLN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgacgctgtcgcatatacgggagatcgaacgtgtcggcatgggcgcggtcagc
ccgcgtgatacgccggtcatccagtcctggctgcgctgcctcaatgactacaagctcgac
ccaacgattgcgcaggaagcctatatcgtgcccgagctgaagcttcgggagcatcgcgag
caggccgaggagctcatccgtatcggccgctccggtctcgaagccctgttcaaccagatt
gccgagcagaattacgtcctgctgctgtcggatgcgcgcggcgttaccgtcgatttcatg
ggcgacccgaccttcgacaaccagttgcggagggcggggctttaccttggctcggaatgg
tcggaaaaccgggccggtacctgcgccgttggcgcctgcctcgtttccggcgagccggtg
atcatccatcaggatgaccatttcgataccagccatatcgggctgacctgcactgcggcg
cccgtcttcgatacgctcggcgatctcaccgccgtgctcgacatttcccagctgcgctcg
ccgacggccaaggccagccagcaactggcgctgcatctcgttgcctccaccgcgcggcgc
atcgagcttgccaatctcatgacccgcacccgcaatgactgggtgttgcgtcttgcccgt
tcacctgagtttcttgacgtcgatcccgatgcggcgatcgcccttgatggcagcggacgt
atcaccggcatgacccatggtggcttcggcgcgctggcgcgctccatgaacatgcacggg
cttgccacccgcgattttctcggccagccgatttcctcggtcttcgatatcgatgtggac
gacctgccgcgcttcatgcgcgggcggccgaatggcgagcggcttttgcgcgcccgcaac
ggtctggtgctttttgccagcgcgatcgcgcccgccgtcagcattcgcgctcctgtcacg
ccagagccacgcttgccgcgagcgctgagggacatgagcaacggcgatccggcgatggaa
aaggtgcaggcgcgggcagcaaagcttgccgctcgcgatattcccatcctcattcagggt
gagacgggcagcggcaaggaatatctggcacgggcgatccatgacagctgcaacagcgac
ggtaatttcgtcgccgtcaattgtgcggcaatcccggagcatctgatcgaatccgaattg
ttcggctatacgcccggtgccttcaccggcgccagccagaaaggcaagcgcggtctcatc
gaggaggcaagtggcggcactttgttcctggatgagattggcgacatgccgctttctctt
caaagccgcctgctgcgcgtgctttcggaaaacgaggtgcagccggttggcgcattgaaa
gccaagccggtgcgtctgagagtactgtccgcatcgcaccgcgatcttgccgaactggtg
aaggaaggccgtttccggcaggacctctattatcgcctgaacgccgcaacggtgacgctg
ccggcgctgcgagagcgcgaggatctcggctggctgatcgatcagtttctccgccgcatc
gagaaggaaaacggcgagacctacaggatcgataaggcggcacgggcaattctgcttgac
catgactggccgggcaatctgcgcgaactcttcaatgcactgcgggttgcagctgcgctt
tccgatggcggcaagatcgatccgggttgcctgcctgaacacctctttgccgaagtcgcc
accgatgatgctttgcgcgatgacgacgatctgcgccgggcgctgaaggactgcggcaac
aacgtctcggcgctggcgcgaagcctcggcgtcaaccgctccaccattcaccgccgtctc
aaacgcctgaattga
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