Agrobacterium tumefaciens H13-3: AGROH133_11879
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Entry
AGROH133_11879 CDS
T01432
Name
(GenBank) transcriptional regulator
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agr03000
]
AGROH133_11879
Transcription factors [BR:
agr03000
]
Prokaryotic type
Helix-turn-helix
XRE family
AGROH133_11879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_19
HTH_31
HTH_3
HTH_24
HTH_25
HTH_26
HTH_AsnC-type
DUF6626
Motif
Other DBs
NCBI-ProteinID:
ADY66750
LinkDB
All DBs
Position
linear:1122468..1123886
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AA seq
472 aa
AA seq
DB search
MAMEKLFIGRKVRGLRENARATQAQFAERLGISASYLNQIENNQRPVSASVLVTLVEKFQ
LDVTELATGENDRLVSAVREALKDPLFLNYEPGLQELKLIAQNAPGFAHALLRAHQAYRQ
NSEQLVQLDDRLGRGTAQVERTPYEEVRDFFHFVDNYVAEIDLLAEELAYELEIEGGETY
GILAAHLRSRFGVHITRTEAAGGLIRHFDPAGKTLALSSYMAAPTRCFQLALQIAQLHAG
ATVDRVLAGAGFRSAEAAEICRIGLHNYFAAALILPYGQFHRAAQELRHDLELLAVRFGA
SLEQVAHRLSTLQRPGQKGVPIFFAKIDRAGNITKRHSATRLQFARFGAACPLWNIHQAF
ESSDRIVRQLAETPDGVRYLSIATQIEKAGAGFNTDRPRYAIALGCEISHAQNFVYADTL
DLTNAASFKPIGVSCRVCERVDCVQRAVPPLKRKLHVDHLSRGALPYRIADF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaaaagctcttcatcggccgcaaggtccgcggccttcgcgaaaacgcccgc
gccacgcaggcgcagtttgccgaacggctcggcatttcggcgagttatctgaaccagatc
gaaaacaatcagcgacccgtttccgccagcgttctggtgacgctggtggaaaaattccag
ctcgacgtgacggagctggcaaccggcgaaaacgaccggctggtttccgctgtgcgcgag
gccctgaaagacccgctgttcctgaattacgagcccgggctgcaggagctgaagctgatt
gcgcagaacgcaccgggttttgcccatgcgcttttgcgcgcccaccaggcctaccggcaa
aatagcgagcagctggtgcagctggatgacaggctggggcggggaaccgcgcaggtggaa
agaacaccttacgaagaggtccgcgatttcttccacttcgtcgacaattacgttgccgag
atcgatcttctggcggaagaacttgcatacgaactggagatagagggcggtgagacctac
ggcattctcgcggcccatctacgcagccgcttcggtgtccatatcaccagaacggaggcg
gcgggcggattgatccggcatttcgatccggccggcaaaacgctggcgctcagttcctac
atggcagcaccgacccgctgttttcagcttgcgcttcagatcgcccagcttcatgcggga
gcaaccgtggacagagtgctggccggcgccggtttccgtagcgccgaagccgcggaaatc
tgtcgcatcggccttcacaactatttcgccgccgcgctgatcctgccatatgggcaattt
caccgggctgcacaggaattgcgccacgatctggaacttctggccgtgcgcttcggcgca
agccttgaacaggtggcgcacaggctcagcactttgcaacgccctggtcagaaaggcgtg
ccgatctttttcgccaagatcgaccgggctggcaacatcaccaaacgccacagcgccaca
aggctgcaatttgcccgtttcggcgcggcctgtccgctctggaacattcatcaggccttc
gaaagctccgacaggatagtacgccagctggcggaaacacctgacggcgtgcgctatctt
tccatcgccacgcagatcgaaaaagccggcgccggtttcaacacggacaggccacgttat
gccatcgcgctcggctgcgaaatttcccatgcgcagaatttcgtctatgccgatacactc
gatctcaccaatgccgcctccttcaagcccatcggcgtttcctgccgggtatgcgaaagg
gtcgattgcgtgcagcgcgccgtaccgccgctaaaacgcaaactacatgtcgatcatctc
tcacgcggggccttgccctaccggatcgcagacttctag
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