Agrobacterium tumefaciens H13-3: AGROH133_12030
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Entry
AGROH133_12030 CDS
T01432
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AGROH133_12030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_12030
Enzymes [BR:
agr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AGROH133_12030
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AGROH133_12030
RecFOR pathway proteins
AGROH133_12030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_14
AAA_22
Rad17
AAA_2
nSTAND3
AAA_16
RNA_helicase
ResIII
AAA_17
AAA_18
DUF815
AAA_33
TsaE
AAA_24
AAA_28
NTPase_1
ABC_tran
NB-ARC
IstB_IS21
MCM
Bac_DnaA
Sigma54_activ_2
AAA_7
Cytidylate_kin
NACHT
SKI
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
ADY66827
LinkDB
All DBs
Position
linear:complement(1202248..1203297)
Genome browser
AA seq
349 aa
AA seq
DB search
MPSMSDADRLISADKRGEDIDTTMRPQSLDDFTGQAEARANLKVFIEAAKNRGEALDHVL
FVGPPGLGKTTLAQIMAKELGVNFKSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLN
PAVEEILYPAMEDFQLDLIIGEGPAARSVKIDLSKFTLVAATTRLGLLTTPLRDRFGIPV
RLAFYTVDELELIVRRGARLMGLNMTDDGAREIARRARGTPRIAGRLLRRVRDFAEVARA
EAVTREIADEALTRLLVDKMGLDQLDMRYLTMIAVNFGGGPVGIETIAAGLSEPRDAIED
IIEPYMIQQGFIQRTPRGRVLTGTAWKHLGMQPPKDLEAAQFRLTLEED
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgccctctatgagcgatgcggacagactgatttcggcggacaagcgcggtgaagatatc
gacaccacaatgcgcccgcagtcgctggacgattttaccggccaggccgaggctcgcgcc
aatctcaaggtgtttatcgaggcggcaaagaaccgtggcgaggcgctggaccatgtgttg
ttcgtcgggcctcccggtctcggcaaaaccacgctggcgcagatcatggcaaaggagctt
ggcgtcaacttcaagtccacctccggaccagtgatcgccaaggctggcgaccttgccgca
cttttgaccaatctcgaggagcgcgatgtgctcttcatcgatgaaatccatcgtctcaac
ccggcagtcgaggaaattctctatccggcaatggaggatttccagctcgacctcatcatc
ggtgaggggcctgcggcccgctcggtgaagatcgatctttccaagttcaccctcgttgcc
gcgaccacgcgtcttggtttgttgacaacgccgctgcgcgaccgcttcggcattcctgtc
cgtctggccttctacactgtcgatgagctggagctgatcgttcggcgcggcgcgcggctg
atgggtctgaacatgaccgacgatggcgcacgcgagatagcaaggcgtgcacgcggcacg
ccgcgcatcgccggacggctcttgcgccgggttcgcgatttcgctgaggtggcacgggcg
gaagccgtcacccgtgagattgccgacgaagcgctgacgcggttgcttgtcgacaaaatg
ggtctcgatcagctggacatgcgctatctgaccatgatcgcggtcaatttcggcggcggc
cctgttggtatcgagaccatcgccgctggcttgtcggagccacgtgatgcgatcgaagac
atcatagaaccctacatgatccagcagggtttcatccagcgcacgccgcgcggccgcgtt
ctgaccggcactgcctggaaacatctgggcatgcagccgcctaaagatctcgaggcggcg
caattccggctgacgctggaagaggattga
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