Agrobacterium tumefaciens H13-3: AGROH133_12176
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Entry
AGROH133_12176 CDS
T01432
Name
(GenBank) sensor histidine kinase KdpD
KO
K07646
two-component system, OmpR family, sensor histidine kinase KdpD [EC:
2.7.13.3
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AGROH133_12176
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
agr01001
]
AGROH133_12176
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
agr02022
]
AGROH133_12176
Enzymes [BR:
agr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
AGROH133_12176
Protein kinases [BR:
agr01001
]
Histidine kinases
OmpR family
AGROH133_12176
Two-component system [BR:
agr02022
]
OmpR family
KdpD-KdpE (potassium transport)
AGROH133_12176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KdpD
DUF4118
HATPase_c
GAF_3
HisKA
Usp
GAF_2
HATPase_c_2
GAF
HATPase_c_3
VioE
Motif
Other DBs
NCBI-ProteinID:
ADY66897
LinkDB
All DBs
Position
linear:complement(1275844..1278546)
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AA seq
900 aa
AA seq
DB search
MPDDNRDMPSRPSPDALLENARREARGRLKIFLGAAPGVGKTYEMLMSGRAKLADGVDTI
IGVVETHGRKETETLVQGFEIIARRNIDYRGQSLNEMDLDAILARRPALVLVDELAHTNA
AGSRHPKRYMDVQEILAQGIDVYTTLNIQHVESLNDVVAQITRIRVRETVPDSIIDRADD
VEIIDITPDDLIKRLQDGKVYMPRTARRAIENYFSRGNLTALRELALRRTAQRVDEQLLN
HMQSHAISGPWAAGDRVLVCLDHGGNGPGLVRYARRQADRLRAPWTALHLDTPRSQQLSE
AEKDRLAGTMRLAQQLGGETVTLPALDLTHEIISYANANNFTHIIIGRPRRSWWQRILQR
SLTHDLIDHAGDISVHVISGDKNAEKPVQTVKPATAQSRFSILPYLNSTLFVGLAIVAGI
VLDQALDVQNLALVFLMAVFAAAVRGGLGPGLYASLLGAFAFNFFFLEPRYTLTVRDPES
VVALLFYLGVALVASNLTAAVQRQAAAARMRARTTEDLYLFSKKLAVTGTLDDVLWATAF
QMASMLKVRVVLLLPENNSITVKAGYPPDDTLVDADIAAAHWAWEHNKAAGRGADTLPGA
KRLYLPLRTGSGAVGVVGLDDDRLGPLFTPEQQRLFDALADQAALAIERIQLVSDVDRAR
LAAETDRLRTALLTSISHDLKTPLAAILGSAGTLKDFADDIPLEARTELLLTIVEESERL
NRFISNLLDMTRIGSGAMEPNYGLYFVGDMVGTALSRAAKIVVRHEIVLDIPSDLPMLKV
DPVLFEQVLFNLIDNAAKYAPEQTVIQIRGWRQGRHVFLCVADEGPGIPPDDTERVFDSF
YRVRKADHVQAGTGLGLSICKGFIEAMGGSIHAENRSGRTGAQFTISLPVPAEVPVLNHD
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgataatcgtgatatgccgagcagaccatcgccggatgcgctgcttgaaaac
gcccggcgcgaggcgcgagggcggctgaagatttttctgggcgcagctcccggtgtcggc
aagacctatgaaatgctgatgtccggccgggcaaaactcgcagatggtgtcgataccatt
atcggtgtcgtggaaacgcacggccgcaaggaaaccgaaacacttgtgcagggtttcgag
atcattgcgcgccggaacattgattatcgcggccagtcgctgaacgagatggatctcgac
gccattctcgcccgtcgaccggcgctggttctggtcgatgagctggcccacaccaatgcg
gctggcagccggcatcccaagcgctatatggatgttcaggaaattctcgcgcagggcatc
gatgtctatacgacattgaacattcagcatgtggaaagcctgaacgatgtggtggcgcag
atcacccgtatccgcgtgcgcgaaacggtgccggacagcatcattgaccgggctgacgat
gttgagatcatcgatatcacccccgacgatctgatcaagcgcctgcaggacggcaaggtc
tatatgccccgcaccgcgcggcgcgccatcgagaactatttttcgcgcggcaatctgacg
gccctgcgcgagcttgcgctacggcgcacagcgcagcgggtggacgagcaattgctcaac
cacatgcagtcgcacgccatctccgggccgtgggctgcgggagaccgtgttctagtctgt
ctggaccacggcggcaacggccccggtctggtgcgttatgcccgaaggcaggccgatcgc
ctgcgcgcgccgtggacggcactgcatctggacacgcctcgctctcagcaattgtcggag
gcagagaaggatcggctggccggcaccatgcggctcgcgcagcagttgggcggcgagaca
gtaaccctgccggcgctcgacctgacgcatgaaatcatatcctatgccaacgccaataac
ttcacccacatcatcatcggccgtcccagaaggtcgtggtggcagagaattctgcagcgt
tcgctgacgcatgatttgatagaccatgccggcgatatcagcgtgcatgtcatttccggc
gacaaaaacgcggagaagccggtccagaccgtgaagccggcaacggctcaatcgcggttt
tcgatactgccctatctcaacagcaccctgtttgtcggactggcaatcgtggccggcatc
gtgcttgaccaagcccttgatgttcaaaatctggcgctggtgttcctgatggcggttttt
gcggcagccgtgcgcggagggctggggcctggcctttatgcttccctgcttggtgccttt
gcgttcaattttttctttcttgaaccgcgttataccctgactgtccgcgatcccgaaagc
gtcgtggcgctgctgttctatctcggtgtggcgcttgtcgcctcaaatctgactgcggcg
gtgcagcggcaggccgcagctgcacggatgcgtgcgcgaaccacggaagatttgtacctt
ttttccaaaaaactcgcggttaccggcacgctggatgacgtattgtgggcaaccgcgttc
cagatggcgtcgatgctgaaagtcagggtcgtcctgcttctgcccgaaaacaattcgatc
accgtcaaggcgggctatccgcctgatgacacgctcgtggatgcggacattgcggccgca
cactgggcctgggaacacaacaaggctgcaggccggggcgccgatacgctcccgggtgcc
aaacgcctttatctgccgctgcgcaccggcagcggcgccgtcggggtggtggggctggac
gacgaccggcttggcccgcttttcacacctgagcagcagcggcttttcgatgcgctggcg
gatcaggcggcacttgccatcgagcgcatccagctggtttcggatgtcgatcgggcaagg
cttgcggcggaaaccgaccggctgcgcaccgcgcttttgacctccatctcccacgacctg
aaaacgccgctcgccgccattctgggttccgccggaacgctgaaggatttcgccgacgac
attccgctcgaggcgcgcaccgaactgcttctaaccatcgtcgaggaatccgaacggctg
aaccgcttcatttccaacctactcgatatgacgaggatcggttcgggcgcgatggagccg
aattacggattgtattttgttggcgatatggtcggaacagcgctttcacgcgcggcgaaa
atcgttgtcaggcacgagatcgttctggacattccctccgatctgccgatgctgaaggtc
gatccggtgctttttgagcaggttctgttcaatctgatcgacaatgccgccaaatacgcg
cccgaacaaaccgtaatccagattcgcgggtggcggcagggcaggcatgtcttcctgtgc
gttgccgacgaggggccgggtattccccctgatgataccgagcgggtgttcgacagtttc
taccgtgtgcgcaaggcggaccatgtgcaggccgggaccggcctcgggttatccatctgc
aaggggtttatcgaggccatgggtggatctatccacgctgaaaacagatcaggtcgcacg
ggcgcgcaatttaccataagcctgcccgttcccgccgaagtgccggtgctgaaccatgac
tag
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