Agrobacterium tumefaciens H13-3: AGROH133_12328
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Entry
AGROH133_12328 CDS
T01432
Name
(GenBank) dipeptide ABC transporter, substrate binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AGROH133_12328
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agr02000
]
AGROH133_12328
Transporters [BR:
agr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AGROH133_12328
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADY66947
LinkDB
All DBs
Position
linear:complement(1326049..1327557)
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AA seq
502 aa
AA seq
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MKKSLIAGALVMGCLSAAVSPALAASGPIKIVLAEEADLLEPCMATRSNIGRIIMENVSE
TLTELDVRGKNGVQPRLAEKWERNADGSWRFHLREGVKFSDGTGFDAKDVKHSFERIMSD
KNACESRRYFGGMTVTPTIVDDHTIDFKTEPAQPILPLLMSLVTIVPEETKMEFIREPVG
TGPYKLTNWTPGQQIVLTARDDYWGAKPQVTEATYLFRADPSVRAAMVQTGEADLSPSIS
QLDATNPKTDFSYLDSETVYMRLDHNIAPLNDVRVRRALNLAIDRQAFLGTLVPEGAVLA
TALVPPTTLGWNPDVKVFPYDPDGAKKLLEEAKAAGVKVDTPITIIARTANFPNVTEIME
AIQQQLQEVGFKIDLKFLEVAEHESYYSKPFKEGRGPQIVAAMHDNSKGDPSFTMFFKYA
TKGTQSGFSDPKVDDLIERASAAVGDERAKLWSELIAYLHDDVVADVLLFHMVGFSRVSE
RLDFKPTIATNSMLQLSEIGIK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcattgattgcgggcgcccttgttatgggttgccttagcgccgcggtttcg
ccggcgcttgcggcgtcggggccgatcaagatcgtactggcggaagaggctgacctgctg
gagccttgcatggcgacccgctccaatattggtcgtatcatcatggaaaatgtcagcgag
acgctgaccgagcttgatgtgcgcggcaagaacggcgtgcagccgcgcctcgctgaaaaa
tgggagcgaaacgcggatggcagctggcgtttccacctgcgtgaaggcgtgaagttttcc
gacggcacgggtttcgatgccaaggatgtcaagcatagcttcgagcgcatcatgagcgac
aagaatgcctgcgaatcccgtcgttacttcggcggcatgaccgtcacccccacgattgtc
gatgaccatacgatcgacttcaagacagagccagcccagcccattctgccgctcctgatg
tcgctcgtcaccatcgtgcccgaagaaaccaagatggaatttatccgcgagcctgttggc
accggaccttacaagctgaccaactggacaccgggccagcagattgttttgactgcacgt
gacgactattggggcgccaagccgcaggtgacggaagcgacctatcttttccgcgctgat
ccctcggttcgcgccgccatggtgcagaccggcgaagccgatctttcaccctccatttcg
cagctcgacgcgacaaacccgaagaccgacttttcctatctcgacagcgagacggtctac
atgcgcctcgaccacaacatcgcgccgctgaatgacgtgcgggtgcgccgtgcactcaac
ctcgccatcgaccggcaggctttcctcggcacgctggttcccgaaggtgcagtgctggcc
accgcactcgttccgccgaccaccctcggctggaaccctgatgtcaaggttttcccctac
gaccctgatggcgcgaagaagttgctggaggaggcaaaagctgctggtgtgaaggtggat
acgccgatcaccatcatcgcgcgcaccgcgaacttccctaatgtcaccgagatcatggag
gcgatccagcagcaattgcaggaagtcggcttcaagatcgacctcaaattcctggaagtg
gccgagcacgaaagctattattccaagcccttcaaggaaggccggggaccgcagatcgtc
gctgccatgcacgacaattccaagggtgatccgtccttcaccatgttcttcaaatatgcc
accaagggcacgcaatccggcttctcggaccccaaggtggatgacttgatcgaacgagca
tctgcagccgtcggcgatgaacgcgccaagctctggtccgagctcatcgcctacctgcat
gacgatgtcgtggcggatgtgctgctgttccacatggttggcttctcacgcgtctccgaa
cggctggacttcaagcccaccatcgccaccaattcgatgctgcagctttcggaaatcggc
atcaagtaa
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