Agrobacterium tumefaciens H13-3: AGROH133_12787
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Entry
AGROH133_12787 CDS
T01432
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agr03032
]
AGROH133_12787
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_12787
Enzymes [BR:
agr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AGROH133_12787
DNA replication proteins [BR:
agr03032
]
Prokaryotic type
DNA Topoisomerases
AGROH133_12787
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AGROH133_12787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ADY67133
LinkDB
All DBs
Position
linear:complement(1535513..1536529)
Genome browser
AA seq
338 aa
AA seq
DB search
MPQPPTRLLAKIGLAYVNDQEPGIARERRGRGFCYRLPGGELLSDNVELKRIKSLGVPPA
YKDVWICIDPSGHLQATGFDARGRKQYRYHPDWHALRGETKFFQLKSFGKALPAIRRRAM
ADIAKQDHGQDMTLAALTLLLDAAYLRVGNRSYLETNGTYGATTLLKRHVSFGETIELRF
AAKGGQKVKRQLRHPRLQKILEEIADLPGKELFVWQDSENQVHSVDSSDLNAYLSRVGGQ
GISAKTFRTWGGTLAAFCHAMEHVAAGEKPSIKGMCQAAATELSNTPAICRKSYVHPAVL
DIATEEKAQKKLGRILKVGAKPVSGLRADERRLLAFLP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaccgcccacccgccttcttgccaaaatcggactcgcctatgtcaacgatcag
gagccgggcatagcccgagaaaggcgcgggcgcggtttctgttaccggttgccgggcggc
gaacttctgtccgataacgtggagttgaagcgcatcaaatcgctcggcgtcccgcctgcc
tacaaagatgtctggatatgcatcgacccatccgggcatttgcaggcaacgggcttcgat
gcgcgcgggcgaaagcaatatcgttaccatcccgactggcacgcattgcgcggtgagacg
aagttctttcagctgaaaagcttcggcaaggcgctgcccgccatccggcgacgcgcgatg
gctgacattgcaaaacaggatcacggtcaggacatgacactggcggccctgacgctgctt
ctcgatgccgcctatctgcgcgtcggcaaccgttcttatctcgaaaccaacggtacctat
ggcgcaaccacattgctcaagcgccacgtgtccttcggcgagacaatcgaactgcgcttt
gcagccaagggcgggcagaaggtgaagcgtcaattgcgccacccgcgcctccaaaaaatc
ctcgaggaaatcgccgatctgcccggcaaggagctgttcgtctggcaggacagtgaaaac
caggttcactccgtcgattcaagcgatctcaacgcctatctttcccgcgtcggcggacaa
ggcatttccgccaagactttccgtacctggggcggaacgcttgcggccttctgtcatgcg
atggaacatgtggctgcgggcgaaaaacccagcatcaagggtatgtgtcaggcagcggcg
acggaactgtccaacacacccgccatttgccgcaagagctacgtacatcccgccgttctc
gatatagcaacggaggagaaggcgcagaagaagcttggccgtattctgaaggtgggcgca
aagccggtctcgggccttagggccgatgaaagacgtctgcttgccttcctgccgtga
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