Agrobacterium tumefaciens H13-3: AGROH133_13176
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Entry
AGROH133_13176 CDS
T01432
Name
(GenBank) putative xanthine dehydrogenase YagR, molybdenum binding subunit
KO
K11177
xanthine dehydrogenase YagR molybdenum-binding subunit [EC:
1.17.1.4
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00230
Purine metabolism
agr01100
Metabolic pathways
agr01120
Microbial metabolism in diverse environments
agr01232
Nucleotide metabolism
Module
agr_M00958
Adenine ribonucleotide degradation, AMP => Urate
agr_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
AGROH133_13176
Enzymes [BR:
agr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
AGROH133_13176
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
ADY67314
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All DBs
Position
linear:1737749..1739947
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AA seq
732 aa
AA seq
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MKFDTPAINNPIDRMKVVGQPIPRIDGQEKTTGRAMYAYEWHDPNIPYAYGYPVGAAIAK
GRIRSISTDAAKRSPGVLTVVTTLDVGKREKGKFNTANLFGGDEVQHYHQAVAVVVAETF
EQARAAASLVTVEYDTAPGSFDLKKAKDSAVKPDEKQQPDTAVGDFEGAFKSAPVTLDES
YTTPDQSHSMMEPHASIAAWHGDKLTVWTSSQMIDWWRSDLATTLGIDKDNIHLMSPFIG
GGFGGKLFLRADAVLAAFAAKATGRPVKVALPRPFIANNTTHRPATIQRIRIGATQDGKI
TAIAHESWSGDQPGGQLETAVNQTRLLYAGENRMTAMRLATLHLPEGNAMRAPGEAPGLM
ALEIAIDEIAEKVGVDPVEFRILNDTQVDPEKPERAFTQRNLVGCLKLGAERFGWNQRGK
PGSRREGNWLIGSGVAAALRNNLLLPSAARVRLGADGIATVETDMTDIGTGSYTIIAQTA
AEMLGLPVDRVAVQLGDSRFPVSAGSGGQFGANCSTSGVYAACVKLREAVAQKLGFNTDD
VVFENGQVRSGNRSVALTEAAAPNGLVGEDGMEWGDLSEAHQQSTFGAHFVEVGVDVATG
ETRIRRMLAVCAAGRILNPITARSQVIGAMTMGVGGALSEELAVDTKQGFFVNHDLAGYE
VPVHADIPHQEVIFMDEADPMSSPMKAKGVGELGLCGVSAAVANAIYNATGVRVRHYPVT
LDKIIGGLPDVA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgacacacctgcaatcaacaatcccatcgaccggatgaaagtcgtcggtcag
cctatcccccgcattgacggccaagagaaaacgacgggccgagcaatgtatgcctacgaa
tggcatgatccgaatattccttacgcctacgggtatccggtcggtgccgcgattgcgaag
ggccgtatccggtcgatatcgaccgacgccgcaaagcggtcccccggcgttttgacggtc
gtcaccaccttggacgtgggcaagcgcgagaagggtaaattcaacacagccaatcttttt
ggtggcgatgaagtccagcactatcaccaggcggtggcagtggtcgtcgcagaaaccttc
gagcaggcgcgcgccgcagcttcgcttgtgacagttgaatatgataccgcgcccgggagc
ttcgatctcaagaaggccaaggacagtgcggtcaagcccgacgagaagcagcagcccgac
acggcagtcggtgacttcgagggagccttcaagagcgcaccggtcactctcgacgagagt
tataccactccagatcagtcacattccatgatggagccccatgcgtccatcgctgcgtgg
catggcgataaactgaccgtttggacgtccagccagatgattgattggtggcgatccgat
ctggcgactacacttggtatcgacaaggacaatattcatttgatgtcgccattcataggc
ggggggttcgggggtaagcttttcttgcgggccgacgcggtgctcgctgcctttgcagca
aaggctactggacgtccggtcaaggtcgcgcttccccgtccgttcatagcgaacaacacg
acgcatcggccggcgacgatccagcgtattcgcattggagcgacacaggacggcaaaatc
accgcgattgctcacgaaagctggtcgggtgaccagcctgggggccagctggaaacggct
gtcaatcagacacgactgctctacgcgggtgagaaccggatgactgccatgagactggcc
acgcttcacttgcccgaaggcaatgcgatgcgggcgcccggcgaagcgccggggttgatg
gccctcgagatcgccatagacgagatagccgaaaaggtgggcgtcgatccggtcgagttt
cggatactcaacgacactcaggtcgaccctgagaagcccgagcgcgcttttacccaaagg
aacctggtcggatgtctcaagctcggggcggaacggtttggctggaaccagcgcggcaag
ccgggttcccgacgagaaggaaactggctgatcggatcgggtgttgcagccgcgttgcga
aacaatcttctcctcccatccgcagcaagggttcggctcggcgctgacggcattgcaacg
gttgaaaccgatatgaccgatatcgggaccggcagctataccatcatcgcacaaacagca
gctgagatgttgggcctgccggtcgatcgagtagccgtccagctgggcgattcccgcttt
ccggtttcggcggggtcgggcgggcagttcggcgcgaactgttctacctctggcgtctac
gcagcctgcgtgaagcttcgtgaggcggtggcgcagaaactcggctttaacactgatgac
gtcgtgttcgagaacggacaggttcgatcaggaaaccgttcggtagcgcttacggaggcg
gctgcgccaaacggccttgttggcgaggatggaatggaatggggcgatctttccgaagcc
catcaacagtcaacgttcggtgcccacttcgtggaagtcggtgttgacgtggccacgggt
gaaacgcgcattcgacgcatgctggccgtctgtgcggccggacggatcctgaacccgata
acagcgcgcagccaggtcattggtgccatgacaatgggtgtgggtggagccctgtccgag
gagttggcggtcgatacgaagcaaggcttcttcgtcaaccacgatctggctggctacgaa
gttccggtgcatgccgacattcctcatcaggaagtgattttcatggacgaagcagatccc
atgtcgtcgccgatgaaggccaagggcgttggcgagcttggtctctgcggggtttctgca
gccgtcgccaacgcgatctacaatgccaccggggtgagggtgcgtcactatcctgtgacg
ctcgacaagatcataggcgggctgccggatgttgcatga
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