Agrobacterium tumefaciens H13-3: AGROH133_13624
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Entry
AGROH133_13624 CDS
T01432
Name
(GenBank) oligopeptide ABC transporter, substrate binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AGROH133_13624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agr02000
]
AGROH133_13624
Transporters [BR:
agr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AGROH133_13624
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADY67475
LinkDB
All DBs
Position
linear:1927661..1929196
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AA seq
511 aa
AA seq
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MPRTYFSQPLKVTRRAALALALGTALWMPLSMTDAAAAPKTALTLGMTVEPTGLDPTIAA
PVAIGQVSWQNIFEGLVTIDHDGKVKPQLAESWEISADGKTYTFKLRQGVTFHDGETFDS
AVAKFSLDRARGETSVNPQKRFFTAIESIETPDATTLVLKLKQPAGSLIYWLGWPASVMV
APKSADNNRTTPIGTGPFKFVNWAKGDKVELEKNAAYWDKAVAVKLEKATFRFVSDPQAQ
AAALKSGDIDAFPEFGAPELMTSFDGDARLGTFVGNTELKVVAGMNNARKPFNDKRVRQA
LMMAVDRGTVIEGAWSGYGTAIGSHYTPNDRGYIDTTGVHSYDIDKAKALLAEAGYPDGF
SFTIKAPQMAYAQRTSQILQAMLAEIGVTMTIETTEFPAKWVADVLKGADYDMTIVAHAE
PMDIDIYSRDPYYFNYKNPAFNEVIANVEKTADAAEQEKLYGEAQKILAEDVPALFLFVM
PKLGVWDKKLKGLWENEPIPSNVLTDVHWEE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcacttatttttcgcagccgctgaaagttacgcggcgcgccgcgcttgcgctt
gcactggggacggcgctctggatgccgctttctatgacggacgccgcggccgcgccgaag
accgccttgacgctgggcatgacagtggagccgacgggtctcgacccgacaattgcggca
cccgtcgccatcggccaggtcagctggcagaacatattcgaaggtctcgtcaccatcgac
cacgacggcaaggtgaaaccgcagcttgccgaaagctgggaaatttcagccgatggcaag
acctacacgttcaagctgcggcagggggttacgttccacgacggcgagaccttcgattcc
gccgttgcgaaattttcgctcgaccgggcgcgcggtgaaacgtcggtaaacccacaaaaa
cgcttcttcaccgccatcgagagcatagaaacgccggatgccacgacgctggtactgaag
ctgaagcagccggcgggcagcctgatctactggctcggctggccggcctccgtcatggtt
gcgccgaagagcgctgacaataaccgtaccacgcccatcggcaccggcccgttcaagttc
gtgaactgggccaagggcgacaaggtggaattggagaagaacgcggcctattgggacaag
gcggtggcggtgaagcttgaaaaggccaccttccgcttcgtttccgatccgcaggcgcag
gcagcggcactgaaatccggcgatatcgatgccttcccggaattcggcgcgccggaactg
atgacgtccttcgacggcgatgcgcgtctcggtaccttcgtcggcaatacggaactcaag
gtcgtggctggcatgaacaatgcccgcaaacccttcaacgacaagcgcgtgcgccaggcg
ctgatgatggcggtggaccgcggcacggtgattgaaggcgcatggtcgggttacggcacg
gccatcggcagccactacacgccgaacgatcgcggttacatcgatacgaccggtgttcat
tcttacgatatagacaaggcaaaggcgcttcttgccgaagcgggttaccccgacggtttc
agcttcacgatcaaggccccgcaaatggcctatgcccagcggacctcgcaaatcctccag
gcgatgttggccgaaatcggtgtcaccatgaccatcgagaccacggaatttccggcaaaa
tgggtggcggatgttttgaagggcgcggattacgacatgaccatcgtcgcccacgctgag
ccgatggatatcgatatctactcccgcgatccctattatttcaactataagaaccctgcc
ttcaacgaggtcatcgccaatgtcgaaaagacggcggatgcggccgagcaggaaaagctt
tacggcgaagcccagaaaatcctcgccgaagatgtgccggcgctgttcttgttcgtgatg
ccgaaactcggcgtctgggacaagaagttgaaggggttgtgggaaaacgaacccattccg
tccaatgtgctgacggatgtgcattgggaagagtga
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