Agrobacterium tumefaciens H13-3: AGROH133_13916
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Entry
AGROH133_13916 CDS
T01432
Name
(GenBank) protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00362
Benzoate degradation
agr01100
Metabolic pathways
agr01120
Microbial metabolism in diverse environments
agr01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AGROH133_13916
00624 Polycyclic aromatic hydrocarbon degradation
AGROH133_13916
Enzymes [BR:
agr01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
AGROH133_13916
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
ADY67577
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Position
linear:complement(2036285..2037025)
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AA seq
246 aa
AA seq
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MSNTKPETGPFFARDRDIHPLAYAPWYKTSVLRSPQRALISLEGTKSEITGPVFGHSLLN
ELDNDLILNYARPGEMPIGPRILVHGRVLDERGRGVDGALVEFWQANAGGRYRHKKETYL
AAIDPNFGGVGRTITDENGYYWFKTIQPGAYPWPNGVNDWRPAHIHFSVFGHGFAQRLIT
QMYFEGDPLIWKCPIVKTIPDEDAIKRLIAPLDMNSNIPMDMLAYKFNIVLRGRRSTFFE
NRKEGN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatacaaagcccgaaaccgggccgttcttcgcacgcgaccgcgacattcatccg
ctggcctatgctccctggtacaagacctctgtcctgcgttctccgcagcgcgccctgatt
tcgctggaaggcaccaaaagcgagatcaccgggccggttttcggccacagcctgctgaac
gagctggataacgacctgatcctcaattatgcccgccctggcgaaatgccgattggcccg
cgcattctggtccacggccgggtgctggacgagcgcggccgcggcgtggacggtgcgctc
gtggaattctggcaggccaatgccggcgggcggtatcgccacaagaaggaaacctatctc
gccgccatcgatccgaattttggcggcgtcggccgcacgatcacggatgagaacggttat
tactggttcaagaccatccagcctggcgcttacccctggccgaacggcgtcaacgactgg
cggcctgcccatatccacttctcggtcttcggccacggttttgcccagcggctgataacc
cagatgtatttcgaaggcgatccgctgatctggaaatgtccgatcgtcaaaaccatcccg
gacgaggatgcgatcaagcggctgatcgcgccgctggatatgaattcaaacattcccatg
gacatgctggcatacaagttcaacatcgtgcttcgcggccgccgctccacgtttttcgaa
aatcgcaaggaaggcaactga
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