Agrobacterium tumefaciens H13-3: AGROH133_13962
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Entry
AGROH133_13962 CDS
T01432
Name
(GenBank) ABC transporter, substrate binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AGROH133_13962
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agr02000
]
AGROH133_13962
Transporters [BR:
agr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AGROH133_13962
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ADY67602
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All DBs
Position
linear:2064958..2066187
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AA seq
409 aa
AA seq
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MSMKFIAIAALALATTVAPCLAADTNMKNLDFDLSKVTRENFYDIVVPAAKAEGTVTMYN
FAGSFADTWKELITRFEAKYGIKVTYSDVKGDQANQQLIAVQAAGQDSPVDAYFAGGGGY
PLLSSKGVVGNIPLTKILPNMANYNPELAETVFGKAHGGSFPLVHLNQTALGYDSAFVKA
EDVPNSFDDLLVWAEKNPKRLGVTLPAKGGSGGGFIYSVALNYLTGDCRKQLTDYNQTLQ
QAEDWAMTSECLTPVWDYYRRLLAVAELTNGNADTLNLINNQQLYMGTVWEDQVMSFLGT
KQLPESFRVTLLEKGQVGSGDAIFVPANAKNVASALLLIDMAMSKEFQLWKLENKASRSP
RADVTNDLMPKAVQEHVLPQSVYPRLSVPAFWDMSTALAEALDEKVLNQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaaatttattgcgatcgccgcgcttgcgctggcgacgacggtagcgccttgc
cttgcggcggacaccaacatgaagaacctcgacttcgatctgtcgaaggtcacgcgcgaa
aatttctatgacatcgtcgttcccgctgccaaagcggaaggcacggtgacgatgtacaat
tttgccggcagtttcgcggatacgtggaaagaactgatcacccggttcgaggccaaatat
ggcatcaaggttacctatagcgacgtaaagggtgatcaggcgaaccagcagctcatcgcc
gtgcaggcggctgggcaggattcacccgtcgacgcctatttcgctggcggtggcggttat
ccgcttttgtcttccaagggcgtcgtcggcaatattccgctgacgaagatcttgcccaac
atggccaattacaatccggaactggccgagaccgttttcggcaaggcgcatggcggcagt
ttccctctggtgcatctcaaccagaccgccctcggttacgattccgccttcgtgaaagcc
gaagacgtgccgaacagcttcgacgatcttctcgtctgggctgaaaagaacccgaagcgc
cttggagtcaccctgccagccaagggcggctccggcggcggcttcatctattcggtggcg
ctcaattatctcaccggcgactgccgcaagcagcttaccgactataatcagacgctgcag
caggccgaagactgggcaatgacgtccgagtgccttacgccggtctgggattattaccgt
cgtcttcttgccgtggctgaactgacaaacggcaacgccgacacgctcaacctgatcaac
aaccagcagctctacatgggcaccgtctgggaagaccaggtcatgagcttcctcggcacc
aagcagctgccggaaagcttccgcgtcacgctgctggaaaaaggccaggtcggctcgggc
gatgccattttcgtgccggcaaatgccaagaacgtcgcatccgcgctccttctcatcgat
atggcgatgagcaaggagttccagctctggaagctggagaacaaggcttcgcgctctccg
cgggcggatgtcaccaacgacctgatgcccaaagccgtacaggagcatgttctgccgcaa
agcgtttatccccgcctgtcggttccggcgttctgggacatgtcgacggcccttgccgaa
gcgctcgatgaaaaagtgctcaaccagtaa
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