Agrobacterium tumefaciens H13-3: AGROH133_13964
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Entry
AGROH133_13964 CDS
T01432
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AGROH133_13964
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agr02000
]
AGROH133_13964
Transporters [BR:
agr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AGROH133_13964
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_16
ABC_ATPase
AAA_29
Rad17
RsgA_GTPase
nSTAND1
MIT_C
AAA_22
nSTAND3
ATPase_2
AAA_28
AAA_23
AAA_25
ORC-CDC6-like
AAA_18
nSTAND_NTPase5
NACHT
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ADY67603
LinkDB
All DBs
Position
linear:2066273..2067313
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AA seq
346 aa
AA seq
DB search
MSELEISNISKDYGLSRALHPVSITVERGEFVTILGPSGCGKSTLLRILTGISQPSGGEI
RLGGKRIDQAPPEARDIAMVFQSYALFPHMSVAKNLGFGLKMKKVPKDERARRIAHALEI
CNLTGLVDRMPRQLSGGQQQRVALARAIVMQPSLLLFDEPLSNLDAKLRDTLRHELTELH
RRIGATSLYVTHDQAEAMAMSDRIVVMNAGRVVEVGTPLELYRAPKHAFTAGFLGQTNLL
PVLAEGRHAQLPWEQSVTLDATAAGSAQISVRPENIHISADEAGAGTVSAVSFMGANALY
TVEIGSHQIKISQSGAENLIDAGRRVALRFPGSVHLLDDGLAGEAA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactcgagatcagcaatatcagcaaggattacggtttgagccgggcgcttcat
cccgtgtcgatcactgtcgagcggggcgaattcgtcaccattctcggcccctcgggctgc
ggcaagtccacgcttttgcgcatcctcaccggcatcagccagccttcgggaggcgaaatc
cggctgggcggcaagcgtatcgatcaggcgccgccggaagcgcgcgacatcgccatggta
ttccagtcctatgcgcttttcccgcatatgtcggttgccaaaaaccttggcttcggcctg
aagatgaagaaggtcccgaaggacgagcgcgcgcgccgcatcgcccatgcgcttgaaatc
tgtaatctcactgggctggtggaccgcatgccgcgacaactgtccggcggacagcagcag
cgcgtggctctggcgcgcgccattgtcatgcagccaagcctcttgctgttcgacgagccg
ctctcgaacctcgacgccaagctccgcgacacgctgcgccatgaactgactgaacttcac
cgccggatcggcgcgaccagcctttatgtgacgcatgatcaggccgaggccatggcgatg
tcggaccggatcgtggtgatgaatgccggccgcgtcgttgaagtgggaacaccgctcgaa
ctttaccgtgcgcccaaacacgcctttaccgccggctttctgggtcagaccaaccttttg
ccggttttggctgagggtaggcacgcgcaattgccttgggagcagtccgtaacgctggat
gcgactgctgccggctccgcacagatttcggttcgcccggaaaacatccacatcagcgcc
gacgaggcgggtgccggcacggtctctgccgtttccttcatgggcgccaatgcgctctat
acggtcgaaatcggcagccaccagatcaagatcagccagtccggtgcggaaaatcttatc
gatgcgggacgcagggtcgccttgcgttttcccggatcggtacatctgctcgatgacggg
ctggcaggggaggcggcgtga
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