Agrobacterium tumefaciens H13-3: AGROH133_14505
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Entry
AGROH133_14505 CDS
T01432
Name
(GenBank) Ku family containing protein
KO
K10979
DNA end-binding protein Ku
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AGROH133_14505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_14505
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AGROH133_14505
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
UQ_con
Motif
Other DBs
NCBI-ProteinID:
ADY67913
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All DBs
Position
pAspH13-3a:complement(195777..196598)
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AA seq
273 aa
AA seq
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MAPRRPYWRGYLKLSLVTCPVAMTPATSESEKVRFHTLNKDTGNRVVSQYVDSVTGKPVK
DDHEAKGYERGENDYVLLTDEDLESVELETVRTIDIEKFVPRGSIEWVYLETPYYLTTND
KIGDEAFAVIRQAMEAEDVVGISRVVLGRRERAVVLEPRGEGIVVWTLRFGDEVRPESEY
FTGIDKKSDAKNVSAIEAVIKKRLKDWSPEMVSDPIQESLLKLIADKKKAKKPLKARTSK
STKDDEEEKSNVVNIMDALKKSVAKELKSRKTG
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacgtcgcccatattggagaggctacctcaagctctcgctcgtcacctgccct
gtagcaatgaccccggccacatcggaatccgaaaaagtccgcttccatactctcaacaag
gataccggaaaccgcgtggtttcccagtacgtggacagcgtgaccggcaagcccgtgaag
gatgaccacgaggcaaagggctacgagcgcggcgaaaacgattacgtgctcctgaccgac
gaggatctggaatccgtcgagctggagacggtccgcacaattgacatcgaaaaattcgtg
ccgcgtggcagcatcgaatgggtctatctcgaaaccccgtactacctcaccacaaacgac
aaaattggcgacgaagctttcgcggtcatccgccaggctatggaggcggaggatgttgtt
ggcatctcacgtgtcgtgctgggtcgccgcgaacgagcggtcgtgctggagccgcgcggc
gaaggaatcgtcgtgtggacccttcgcttcggagatgaagtgcggccggaaagcgaatat
tttaccggcatagacaaaaagtcggacgccaaaaacgtgtcagcgattgaagctgtcatc
aagaaaaggctgaaggactggtcgccggagatggtgtccgatccgatccaggaaagcttg
ctgaaactcattgccgataagaagaaagccaagaagccgttgaaggccaggacttcgaaa
tccacgaaggatgatgaagaggaaaagagcaacgtcgtaaacatcatggacgcattgaag
aagtctgttgccaaggagctgaaatcacgcaaaacaggttga
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