Agrobacterium tumefaciens H13-3: AGROH133_14506
Help
Entry
AGROH133_14506 CDS
T01432
Name
(GenBank) Ku family containing protein
KO
K10979
DNA end-binding protein Ku
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AGROH133_14506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_14506
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AGROH133_14506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
MukE
Kri1
Coilin_N
Motif
Other DBs
NCBI-ProteinID:
ADY67914
LinkDB
All DBs
Position
pAspH13-3a:complement(196602..197381)
Genome browser
AA seq
259 aa
AA seq
DB search
MINESTGNRLKREFIDSETEEVVERDQQVKGFETGNGDYIMIDPDEIAAVVPDSDKMLEA
EAFIPCGEIDDVYFDKPYYLVPVDEADHDAFTSIRDALSKTSATAIARTVLFRRMRTVLI
RAHGKGMIATTLNYDYEVRPSEEVFKDVAKVKAEAEMLDLAKHIITTKKGDFDPAKFDDR
YEDALAALVKAKAEGKTLPKPKPIKVSKPNDLLKALRESAGMDKPSASKPKAANANSGKK
ATASKSSKSRAKPAAKKAS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatgaaagcaccggaaaccgcctgaaacgcgagttcatcgacagtgagactgag
gaagtcgtggaacgagatcaacaggtaaagggcttcgagacgggcaacggcgactacatc
atgatcgaccctgatgagatcgcggcggtcgttcccgattccgacaagatgctggaggct
gaagccttcatcccgtgtggggagatcgatgacgtctatttcgacaagccctactatctg
gtcccggtcgacgaagccgatcatgacgctttcaccagcatacgggatgccctgagcaag
accagtgccacagcgattgctcgcactgtgctcttccgccggatgcgaacagtcctgatc
cgggcgcatggtaaggggatgatcgctacgaccctcaactatgactacgaagtccgtcct
tcagaggaagtcttcaaagacgtggcaaaggtcaaggccgaagccgagatgctcgatctt
gccaagcacatcatcaccacgaagaaaggcgacttcgacccggcaaaattcgatgatcgc
tacgaggatgccctcgctgcgctggtgaaggcaaaggcggagggaaagacccttccgaag
ccgaagcctataaaggtttccaagccaaacgacctgctcaaggctctgcgcgagagcgct
ggcatggataagccgtcggcaagcaagccgaaggccgccaacgccaactcaggcaagaag
gccacggcttccaagtctagcaagagccgggcaaaacccgcagctaagaaagcgagctga
DBGET
integrated database retrieval system
