Agrobacterium tumefaciens H13-3: AGROH133_14512
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Entry
AGROH133_14512 CDS
T01432
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGROH133_14512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agr03019
]
AGROH133_14512
03110 Chaperones and folding catalysts [BR:
agr03110
]
AGROH133_14512
03029 Mitochondrial biogenesis [BR:
agr03029
]
AGROH133_14512
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
agr04147
]
AGROH133_14512
Enzymes [BR:
agr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AGROH133_14512
Messenger RNA biogenesis [BR:
agr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AGROH133_14512
Chaperones and folding catalysts [BR:
agr03110
]
Heat shock proteins
HSP60 / Chaperonin
AGROH133_14512
Mitochondrial biogenesis [BR:
agr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AGROH133_14512
Exosome [BR:
agr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AGROH133_14512
Exosomal proteins of other body fluids (saliva and urine)
AGROH133_14512
Exosomal proteins of breast cancer cells
AGROH133_14512
Exosomal proteins of colorectal cancer cells
AGROH133_14512
Exosomal proteins of bladder cancer cells
AGROH133_14512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADY67920
LinkDB
All DBs
Position
pAspH13-3a:complement(202500..204128)
Genome browser
AA seq
542 aa
AA seq
DB search
MAAKEVKFNTDARERMLRGVDVLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGI
DIAVDAVVKELKANARKITSNSEIAQVGTISANGDEEIGKYLAEAMEKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNQDKMRVELEEPYILVHEKKLSNLQAMLPVLEAV
VKSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDVGIKLENVTLEMLGRAKKVAIEKENTTIIDGVGSKGEIDSRVAQIRAQIEETTSDY
DRDKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALL
RAVKALDGLPTANDDQRVGIDIVRRAIEAPARQIAENAGAEGSIVVGKLREKTDLSFGWN
AQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKDAAPALPAGAGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaaagaagtcaaattcaacaccgatgcccgtgaacgcatgctgcgtggggtc
gacgttctcgctaacgcggtgaaagttacacttggcccgaaaggccgcaacgtcgtaatc
gacaagtcgttcggcgcgccgcgcattaccaaggacggtgtgtcggttgccaaggaaatc
gagctggaagacaagttcgagaacatgggcgcccagatgctgcgcgaagtggcatcgaag
accaatgaccttgccggcgacggcaccaccacggcgaccgttcttgcccaggcgatcgtc
aaagaaggtgccaaggctgttgcctccggcatgaacccgatggacctgaagcgcgggata
gacattgccgtcgatgcggtggtcaaggaactgaaggccaacgcccgcaagatcaccagc
aattccgaaatcgcccaggtcggaaccatctcggccaatggcgacgaggagatcggcaag
tatctggccgaagcgatggaaaaggtcggcaacgaaggcgtcatcactgtcgaggaagcc
aagaccgccgaaaccgaactcgaagtcgtcgaaggcatgcagtttgaccgcggttatcta
agcccctatttcgtcaccaaccaggacaagatgcgggtcgaactcgaagagccgtatatc
ctcgtccatgagaaaaagctctccaatctccaggcaatgctgccggtgctggaagccgtg
gtgaagtccggcaagcctctgctgataattgctgaagacgtcgaaggcgaagcgctcgcg
accctcgtcgtcaacaagcttcgtggcggcctgaagatcgccgccgtcaaggctcctggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctcaccggcggcacggtg
atttccgaagacgtcggcatcaagctcgaaaatgtcactctcgagatgcttggtcgcgcc
aagaaggtagcgatcgagaaggaaaacaccaccatcatcgatggggtcggctccaagggc
gagatcgatagccgcgtcgcgcaaatccgcgcccagatcgaggagaccacctcagactac
gaccgtgacaagctgcaggaacgtcttgccaagctcgccggcggcgttgctgtcatccgt
gtcggcggatcgaccgaagtcgaggtgaaggagaagaaggatcgcgtcgatgacgccctt
catgcgacccgtgccgctgtcgaagagggcatcctgccgggcggcggtgttgccctgctg
cgcgctgtgaaggcgctggacggtctgccgacagccaacgacgatcagcgggttgggatc
gacatcgtccgccgggcgatcgaggcgcccgctcgccagatcgccgagaatgcaggggcc
gaaggttcgatcgtcgtcggcaagctgcgcgaaaagactgacctttccttcggctggaac
gcccagacaggtgagtatggtgatctctacgctcaaggcgtcattgacccggccaaggtg
gtgcgaaccgccctgcaggacgctgcctcggtcgccggcctgctggtcacgacagaagcg
atgatagcagagaagccgaagaaggacgccgctccagccctgcccgccggcgccggcatg
gacttctaa
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