Agrobacterium tumefaciens H13-3: AGROH133_14652
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Entry
AGROH133_14652 CDS
T01432
Name
(GenBank) DNA binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
agr
Agrobacterium tumefaciens H13-3
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agr03032
]
AGROH133_14652
03036 Chromosome and associated proteins [BR:
agr03036
]
AGROH133_14652
03400 DNA repair and recombination proteins [BR:
agr03400
]
AGROH133_14652
DNA replication proteins [BR:
agr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AGROH133_14652
Chromosome and associated proteins [BR:
agr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AGROH133_14652
DNA repair and recombination proteins [BR:
agr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AGROH133_14652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Glycos_trans_3N
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ROS_MUCR
Motif
Other DBs
NCBI-ProteinID:
ADY68020
LinkDB
All DBs
Position
pAspH13-3a:complement(285097..285375)
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AA seq
92 aa
AA seq
DB search
MTTTNEIVEKIASEQNLTKAQAKSIVETVFASITTAATSGAETSIPGFGKFKIKDTPERE
ARNPATGATIKVAAAKKLTFQPAKALKDVLNK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaccaatgaaatcgtcgaaaagatcgcatccgaacagaacctgaccaaagcc
caggcgaaatcgatcgtcgaaaccgtcttcgcgtcgatcacgacggcagccacgtccgga
gcggaaacatctatcccgggattcggcaagttcaagatcaaggataccccggagcgtgag
gctcgcaatccggcaaccggcgccaccatcaaggttgccgctgcgaagaagcttacgttt
cagcctgccaaagcactgaaagatgtgctgaacaagtga
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