Agrobacterium tumefaciens H13-3: AGROH133_14754
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Entry
AGROH133_14754 CDS
T01432
Name
(GenBank) ABC transporter, substrate binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AGROH133_14754
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agr02000
]
AGROH133_14754
Transporters [BR:
agr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
AGROH133_14754
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ADY68076
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All DBs
Position
pAspH13-3a:338403..339443
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AA seq
346 aa
AA seq
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MKDFNITRRHFGLLAAGAAVAVSAPFAARAAGGTAVAATFPGSWEDGYRTVLTPLVKEAG
FDLTVAPAMAQDQLAKVMASPGNPPYDTLLMSPGQMAVAIENDLIEKIDPSKLKNWSLLD
PAFQGEYGPTVTVEVNGIAYNPDLVPAPKGYRDLFENPAYEGLVSWTGFASNTGVMAYSQ
IAKIFGSGPTDMDAVFKLFKEHPEHLKGVVASTNHQMTLFQQGEIAVFMCSTGNVAKLKA
LGLRAEFVQPETGSPAAPVNIHLTKGAKNPDAAYAYMDAAISKAAQDKLKMPPTEMFPTN
REVELTPGIEAYVKREQLASLVYPDWAAINKNRAEWIRQFDALVAG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactttaacatcacacgacgtcatttcggattgcttgctgccggtgcggctgta
gcggtctccgcccccttcgctgctcgtgccgctggtggcacagccgttgccgcgaccttt
cccggcagctgggaagacggctatcgcaccgtactgacgccacttgttaaggaagcaggt
ttcgacctgacggttgcgccagctatggcgcaggatcagcttgccaaggtcatggcaagc
cccggtaacccgccttacgacacactgctgatgtcgcccggccagatggcggtcgctatc
gagaatgacctgatcgaaaagatcgatccgtcgaagctgaagaactggagcctgctcgat
ccggcgtttcagggcgagtacggcccgaccgtgaccgttgaagtcaacgggatcgcctat
aacccggatctggtgcccgcaccgaagggctatcgcgacctgttcgaaaacccggcctac
gagggcctcgtctcgtggacgggctttgcctccaataccggcgtcatggcctattcccag
atcgccaagatcttcggctcaggcccgaccgacatggatgccgttttcaagctgttcaag
gaacatccggagcatctgaaaggtgttgtcgccagcaccaaccaccagatgacactattc
cagcagggcgagatcgctgtcttcatgtgctcaaccggcaatgtcgcgaagctgaaggca
ttgggcctgagggctgagttcgtccagcccgaaacaggctctccggcagctccggtcaac
atccacctgaccaagggcgccaagaacccggacgcggcttacgcctatatggatgccgcg
atctccaaggcagcgcaggacaagctgaagatgccgccgaccgagatgttcccgaccaac
agggaggtcgaactgacgccaggcatcgaggcctatgtgaagcgcgaacagcttgcgtct
ctggtctatccggactgggcggcgatcaacaaaaaccgtgcggaatggatccgccagttc
gacgctcttgtcgccggttga
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