Agrobacterium tumefaciens H13-3: AGROH133_15080
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Entry
AGROH133_15080 CDS
T01432
Name
(GenBank) ribose ABC transporter, substrate binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02010
ABC transporters
agr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AGROH133_15080
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
AGROH133_15080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agr02000
]
AGROH133_15080
Transporters [BR:
agr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
AGROH133_15080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
PCP_red
S-Me-THD_N
DUF3798
Motif
Other DBs
NCBI-ProteinID:
ADY68221
LinkDB
All DBs
Position
pAspH13-3a:472110..473039
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AA seq
309 aa
AA seq
DB search
MKFSRILLTSAALLALSLGSANAAEVKKIGLAVANLQANFFNQIKQAVEAEAKTRGITVV
TVDAKGDGPTQVNQIQDLLTQNIDALIYIPAGAAAATVPVKLAKAAGVPVINIDRNADGA
PGDTFLATDSVASAKSVCDYIIKQAGGSGKMVIIHGQKGTTPEVDRTKGCMESVKANSGV
KIVAEQWSNMWSQDEGFQIMQNMLQANPDVSIVFAQADGLALGAAQAIKVANPSQKIVVG
GFDGDTAALEALKNGVFDVTATQQTQKMGRTAVEMAVKIVGGEKVPAVQLSEATLTTKEN
VDGFIANHP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcacgcattctgctgacatccgccgcccttctggccctgtcgctcggttca
gccaacgccgccgaagtcaagaagatcggccttgccgttgccaatcttcaggcgaacttc
ttcaaccagatcaagcaggccgtcgaagccgaagccaagacgcgcggcatcaccgttgtc
accgtcgatgccaagggcgacggtccgacgcaggtcaaccagatccaggatctcctgacg
cagaacatcgacgcgctgatctatattcccgctggtgccgctgcggcgaccgttccggtc
aagcttgccaaggcggccggtgtgcctgtcatcaacatcgaccgcaatgccgacggcgca
ccgggcgataccttcctcgccaccgattccgtcgcttccgccaagtcggtctgcgactac
atcatcaagcaggcaggcggctcgggcaagatggtcatcattcatggccagaagggcacg
acaccggaagtcgaccgcaccaagggctgcatggaatcggtcaaggccaattccggcgtg
aagatcgttgccgaacagtggtccaacatgtggagccaggatgaaggcttccagatcatg
cagaacatgctgcaggccaatccggacgtttccatcgtctttgcccaggcagacggtctg
gcgctcggcgcggcacaggcgatcaaggtcgccaacccctcgcagaagatcgtcgttggc
ggcttcgatggcgacacggcagcgcttgaggcgctgaagaacggcgtctttgacgtgaca
gcgacgcagcagacccagaagatgggccgcacggctgtcgagatggccgtcaagatcgtc
ggcggcgagaaggttccggccgtgcaactctccgaggcgacgctgacgacgaaggaaaac
gtcgacggcttcattgccaaccatccctga
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