Actinomadura graeca: AGRA3207_001577
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Entry
AGRA3207_001577 CDS
T07938
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agra
Actinomadura graeca
Pathway
agra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGRA3207_001577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agra03019
]
AGRA3207_001577
03400 DNA repair and recombination proteins [BR:
agra03400
]
AGRA3207_001577
Enzymes [BR:
agra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AGRA3207_001577
Messenger RNA biogenesis [BR:
agra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AGRA3207_001577
DNA repair and recombination proteins [BR:
agra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AGRA3207_001577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
HEM4
Motif
Other DBs
NCBI-ProteinID:
QXJ20802
LinkDB
All DBs
Position
complement(1704619..1706712)
Genome browser
AA seq
697 aa
AA seq
DB search
MSEFEGLRDEAERCLRALAGDRARLRDDQWTAIHALVVERRRALVVQRTGWGKSAVYFVA
TRLLRGRGAGPTVIVSPLLALMRNQIEAADRAGIHARTINSSNTDDWEQIFTEVEAGRVD
VLLVSPERLNNPDFRDLVLPKLAAGAGLVVVDEAHCISDWGHDFRPDYRRLRTLLAELPP
GIPVLATTATANARVTQDVAEQLAGDDALVLRGPLERESLRLAVVKVPTAEQRVAWLGEH
LERLPGSGIIYTLTVAAAHEITGYLRDRGHEVTAYSGQTEQAERLQAEQDLRDNKLKALV
ATSALGMGFDKPDLGFIVHVGAPQSPVAYYQQIGRAGRGVDRAEVILLPGPEDRDIWAYF
ASLAFPPEPTVRTTLDVLENAGRPLSTGALEPLVDLNRARLEMMLKVLDVDGAARRVKGG
WTATGRPWSYDRERYERVTSERRREQQAMLDYIATEGCREKFLRDQLDDPSAVPCGRCDN
CTGDHWSADVTPEGATRARDRLHRPGVDIAPRRMWPTGVKDDLGVSGRIKADQQAETGRA
LGRLTDIGWGNRLRDLFASGDTDVPSDMVDAVVKVLAAWDWPARPTGVVTIGSRSRPRLV
TSLGRRIADIGRLPYLGELVPAGDPVPRRHNSAQRLRSVWQALTVPPELAAALPDATGPV
LLVDDRVETGWTMTVATRLLREAGAPAVLPLTLATPN
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattcgagggactccgtgacgaggccgagcggtgcctgcgcgccctcgccggc
gaccgggcgcgcctccgcgacgaccagtggacggcgatccacgcgctcgtcgtcgagcgg
cgccgcgccctggtcgtccagcgcaccggctggggcaagtccgccgtctacttcgtggcg
acccggctgctccgcgggcgcggcgcgggccccaccgtgatcgtctcgccgctgctggcg
ctcatgcgcaaccagatcgaggccgccgaccgggccggcatccacgcccgcaccatcaac
tcctccaacaccgacgactgggagcagatcttcaccgaggtcgaggctggacgggtcgac
gtcctcctggtcagccccgagcgcctgaacaaccccgacttccgcgacctcgtcctgccc
aagctcgccgccggggcgggcctggtcgtggtggacgaggcgcactgcatctccgactgg
ggccacgacttccgtcccgactaccgccgcctgcgcaccctcctcgccgagctgccgccc
ggcatccccgtcctcgccaccaccgccaccgccaacgcccgcgtcacccaggacgtcgcc
gagcagctcgccggcgacgacgccctcgtcctgcgcggcccgctcgaacgcgagtccctg
cgcctcgccgtggtgaaggtccccaccgccgagcagcgcgtcgcctggctcggagagcac
ctggagaggctgccgggctccggcatcatctacaccctcaccgtcgccgccgcccacgag
atcaccggctacctccgcgaccgcggccacgaggtcaccgcctactccgggcagaccgag
caggccgagcggctccaggccgagcaggacctgcgggacaacaagctcaaggccctggtc
gccaccagcgccctcggcatgggcttcgacaagcccgacctcggcttcatcgtccacgtc
ggcgccccgcagtccccggtcgcctactatcagcagatcggccgcgcgggccgcggggtc
gaccgcgccgaggtcatcctgctgccgggaccggaggaccgtgacatctgggcgtacttc
gcgagcctggcgttcccgcccgaacccacggtccgcacgacgctcgacgtcctggagaac
gccggccgccccctgtcgacgggcgccctggaacccctggtcgacctcaaccgcgcccgc
ctggagatgatgctcaaggtcctcgacgtcgacggcgccgcacgccgcgtcaagggcggc
tggaccgccaccggccgcccctggtcctacgaccgcgagcgctacgagcgcgtcacctcc
gaacgccgccgcgagcagcaggcgatgctcgactacatcgccacggagggctgccgcgag
aagttcctgcgcgaccagctcgacgacccgtccgccgtcccctgcgggcgctgcgacaac
tgcaccggcgaccactggtcggccgacgtcaccccggagggcgcaacccgggcccgcgac
cgcctccaccgcccgggcgtggacatcgccccccgccgcatgtggcccaccggcgtcaag
gacgacctgggcgtttccggccgcatcaaggccgaccagcaggccgagacgggcagggcc
ctgggccgtctcaccgacatcggctggggcaaccgcttgcgcgacctgttcgcctccggc
gacaccgacgtcccctccgacatggtcgacgccgtcgtcaaggtcctcgccgcctgggac
tggccggcccgccccaccggcgtcgtcacgatcggctcgcgttcccgtccccgcctggtc
acgagcctcggccgtcggatagccgacatcggccgccttccctacctgggtgagctggtc
ccggccggagacccggtgccccgccgccacaacagcgcccagcgtctccgctcggtctgg
caggcgctgaccgtcccccccgaactcgcggcggccctccccgacgcgaccggtcccgtc
ctcctggtcgacgaccgcgtcgagaccggctggaccatgacggtggccacccggctcctc
agagaggccggcgcccccgccgtcctccccctgaccctcgcgacacccaactga
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