Actinomadura graeca: AGRA3207_003109
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Entry
AGRA3207_003109 CDS
T07938
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agra
Actinomadura graeca
Pathway
agra03420
Nucleotide excision repair
agra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AGRA3207_003109 (pcrA)
03430 Mismatch repair
AGRA3207_003109 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agra03400
]
AGRA3207_003109 (pcrA)
Enzymes [BR:
agra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AGRA3207_003109 (pcrA)
DNA repair and recombination proteins [BR:
agra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AGRA3207_003109 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
AGRA3207_003109 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DUF6630
AAA_11
DEAD
ABM
ResIII
Motif
Other DBs
NCBI-ProteinID:
QXJ26536
LinkDB
All DBs
Position
complement(3569538..3571808)
Genome browser
AA seq
756 aa
AA seq
DB search
MLDGLNPQQRAAVVHSGGPLLIVAGAGSGKTRVLTHRIAHLLGERDVHPGQILAITFTNK
AAAEMKERVDALVGPRSRAMWVMTFHSACVRILRREAKRLGFPTSFSIYDQADANRLMAL
VCRELDLDPKRYPPKSFSAQVSNLKNELIDYETFKNRASTHMEQTLAEAYEMYQARLQQA
GAMDFDDLIMMTVNLLQVFPEAAEHYRRRFRHVLVDEYQDTNHAQYELVRELTAPISVAG
GSPDGHAEEIGPAELCVVGDADQSIYAFRGATIRNILEFERDYPDATTILLEQNYRSTQT
ILSAANAVIERNADRKPKKLWSDQGEGHKITGYVADNEHDEAAFVAHEVDKLTDAGDARP
GDVAVFYRTNAQSRVFEEVFIRVGMPYKVVGGVRFYERKEIRDLLAYLRVLANPEDTVSL
RRILNVPKRGIGDRAEACVEAYASRERISFWQALRRPEDVPGMATRSINSVREFVALLDE
LRTAAESATPAQLVDQILTKSGYLAELQNSKDPQDETRIENLQELEAVAREFEERLDGES
AEGRLPDFLEQVALVADADSIPGGAKGGPVPPGEQPEETDQGVVTLMTLHTAKGLEFPVV
FLTGMEDGVFPHLRAMSNPKELEEERRLAYVGITRARQRLYLSRATMRSSWGAPQVNPPS
RFLGEVPRVLIDWEREASSTSSPAMSRMAARPGVRSPGNREVPALSPGDKVTHDSFGLGT
VVTVDGAGDKAAASVDFGGEYGVKRLVLRYAPVEKL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgatggcctcaacccgcagcagcgcgccgccgtcgtgcactccggcggccccctg
ctgatcgtcgcgggcgccgggtcgggcaagacccgcgtgctcacccaccgcatcgcccac
ctgctcggtgagcgggacgtgcatccagggcagatcctggcgatcacgttcaccaacaag
gccgccgccgagatgaaggagcgcgtcgacgccctcgtcggcccccgctcgcgcgccatg
tgggtgatgacgttccactccgcctgcgtccgcatcctgcggcgcgaggccaagcggctg
ggcttcccgacgagcttctcgatctacgaccaggccgacgcgaaccgcctcatggccctc
gtatgccgcgagctggacctcgatcccaagcggtatccgccgaagtcgttcagcgcccag
gtctcgaacctgaagaacgagctgatcgactacgagacgttcaagaaccgcgcgtccacg
cacatggagcagacgctcgccgaggcgtacgagatgtaccaggcccgcctccagcaggcc
ggcgcgatggacttcgacgatctgatcatgatgacggtcaacctgctccaggtgttcccg
gaggccgccgagcactaccggcgccgcttccgtcacgtcctcgtggacgagtaccaggac
acgaaccacgcgcagtacgaactcgtccgcgagctgacggccccgatctcggtcgccgga
ggatcaccggacgggcacgccgaggagatcggcccggccgaactctgcgtcgtcggcgac
gccgaccagtcgatttatgcgttccgcggcgccacgatccgcaacatcctggagttcgag
cgcgactaccccgacgccaccacgatcctgctggagcagaactaccgctccacccagacg
atcctctccgccgccaacgcggtcatcgagcgcaacgccgaccgcaagcccaagaagctc
tggtccgaccagggtgaaggtcacaagatcaccggttatgtggccgacaacgagcacgac
gaggccgcgttcgtcgcgcacgaggtcgacaaactcaccgacgcgggcgacgcccgcccc
ggtgatgtcgccgtgttctaccgcacgaacgcgcagtcccgtgtcttcgaagaagtgttc
atccgcgtcggcatgccgtacaaggtcgtcggcggcgtccgcttctacgagcgcaaggag
atccgcgacctcctcgcctacctgcgcgtcctcgccaaccccgaggacaccgtctccctg
cgccgcatcctcaacgtcccgaaacgcggcatcggcgaccgcgccgaagcctgtgtcgag
gcctacgcgtcccgggaacggatctcgttctggcaggccctccgccgacccgaggacgtc
cccggcatggcgacccgctccatcaattccgtccgcgaattcgtcgccctgctggacgaa
ctgcgcacggccgccgagtccgcgactcccgcccagctggtcgaccagatcctgaccaag
agcggctatctcgccgaactccagaattccaaggacccgcaggacgagacccgaatcgag
aacctccaggaactcgaagccgtcgcccgcgaattcgaggagaggctcgacggcgagagc
gccgaaggccgcctccccgacttcctcgaacaggtcgcgctggtcgccgacgccgactcc
attccgggcggagccaagggcgggcccgtccccccgggcgagcagccggaggagaccgac
cagggcgtggtcaccctcatgaccctgcacaccgccaagggcctggagttccccgtcgtc
ttcctcaccggcatggaggacggtgtcttcccccatttgcgggcaatgagcaatcccaag
gaactcgaagaggaacgccgcctggcctacgtcggcatcacccgcgcccgccagcgcctc
tacctctcccgcgccacgatgcgcagttcgtggggagccccgcaggtcaacccgccgtcc
cgtttcctgggcgaggtcccgagggtcctcatcgactgggaacgtgaggcttcgtccacc
tcgtccccggcgatgtcccggatggcagcccgccccggcgtccgctccccgggaaaccgt
gaggtcccggccctctccccgggtgacaaggtcacccacgactcattcggcctgggcacc
gtcgtgaccgtggacggcgctggcgacaaggccgccgcaagtgtcgacttcggcggcgag
tacggcgtcaaacgcctcgtccttcgctacgccccggtggaaaagctctaa
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