Actinomadura graeca: AGRA3207_003494
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Entry
AGRA3207_003494 CDS
T07938
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
agra
Actinomadura graeca
Brite
KEGG Orthology (KO) [BR:
agra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agra03400
]
AGRA3207_003494
DNA repair and recombination proteins [BR:
agra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AGRA3207_003494
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
QXJ26575
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Position
4010764..4011303
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AA seq
179 aa
AA seq
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MSADDGSDRREKAWASGTYPRPANEGRSRNMKANRRSDTKPEIALRRALHALGYRYRKDF
RLDLPGGTRVRPDIVFTARKVAVFVDGCFWHVCPEHGREPTSNEWYWTPKLRRNVERDRA
ADDALKNAGWRVVRLWEHEPLPAAVQAVVVAAGPASVEREPQIASETDQDKSDEPISLT
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgccgatgatggtagcgaccgcagagagaaggcgtgggcgtccggcacctacccc
cgcccggccaacgagggccgttcgcggaacatgaaggcaaaccgccgctcggataccaag
ccggaaattgcgctccggcgcgcattgcatgctctcggttatcgctatcgcaaggacttc
cggctcgatctccccgggggcactcgcgtccggccagacatagtcttcaccgcccgcaaa
gtggcggtattcgtggacggttgtttctggcatgtctgccctgagcacggccgcgagccg
acgagcaacgagtggtactggactcccaagctccgccgcaacgtcgagcgtgaccgggca
gcggacgacgcgctgaaaaacgccggctggcgggtcgtgcgcctgtgggaacacgaaccg
ctccccgctgctgtccaggccgttgtcgtagccgcggggccagccagcgtcgaacgcgag
ccccaaattgcttcagagactgaccaagataaatccgacgagccaattagccttacttga
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