Actinomadura graeca: AGRA3207_004040
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Entry
AGRA3207_004040 CDS
T07938
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
agra
Actinomadura graeca
Pathway
agra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
agra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AGRA3207_004040 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
agra01007
]
AGRA3207_004040 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agra03016
]
AGRA3207_004040 (serS)
Enzymes [BR:
agra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
AGRA3207_004040 (serS)
Amino acid related enzymes [BR:
agra01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
AGRA3207_004040 (serS)
Transfer RNA biogenesis [BR:
agra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AGRA3207_004040 (serS)
Prokaryotic type
AGRA3207_004040 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF349
CCCAP
Motif
Other DBs
NCBI-ProteinID:
QXJ22956
UniProt:
A0ABX8QVV0
LinkDB
All DBs
Position
4589150..4590409
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AA seq
419 aa
AA seq
DB search
MIDLRALREDPERLRASQRARGEDDGVVDRLLDLDERRRSALTSFERLRSEQKSFGKSVS
KAQGDERQALLARAKELAQQVKDAEAGADRLGEELDALLRGVPNLIEEDAPPGGEQDFVV
LETVGEPPAFDFEPKDHLELGEGLGAIDMERGAKVAGARFYYLTGVGARLQYALLNLAME
QAVASGFVPMYPPVLVKPEAMEGTGFLGAHAAEVYQLRQEDLYLVGTSEVPLAAYHMNEI
IDELPRRYVAWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFSYCDPGDAHAEHLRLLEWE
KEMLAKVELPYRVIDVAAGDLGASAARKYDCEAWVPTQGTYREVTSTSNCTGFQARRLAV
RHRDADGKNQPVATLNGTLATTRWIVAILENHQQADGSVRVPEALRKFLGLEVLEPVKR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgattgacctgcgagctcttcgagaggatcccgagcggctgcgcgcctcgcagcgcgcc
cgcggcgaggatgacggcgtcgtcgaccggctgctggacctggacgagaggcgccgctcg
gcgctcacctcgttcgagcggctgcgttccgagcagaagagtttcggcaagtcggtgtcc
aaggcgcagggcgacgagcggcaggcgctgctggcccgcgcgaaggagctggcgcagcag
gtgaaggacgccgaggccggcgccgaccggctcggcgaggagctcgacgcgctgctgagg
ggggtgcccaacctcatcgaggaggacgcaccgcccggcggcgagcaggacttcgtcgtc
ctggagacggtcggcgagccgcccgcgttcgacttcgagcccaaagaccacctggagctg
ggcgagggcctcggcgccatcgacatggagcgcggcgcgaaggtcgccggcgcgcgcttc
tactacctgaccggcgtcggcgcgcgcctgcagtacgcgctgctgaacctcgccatggag
caggccgtcgcgtcgggcttcgtgccgatgtacccgccggtgctcgtgaagccggaggcg
atggagggcacgggtttcctcggcgcgcacgccgccgaggtgtaccagctccgccaggag
gacctgtacctcgtcggcacgtccgaggtgccgctggccgcctaccacatgaacgagatc
atcgacgagctgccgcggcggtacgtggcgtggtcgtcgtgcttccgccgcgaggccggc
tcgtacggcaaggacacgcgcggcatcatccgcgtccaccagttcgacaaggtggagatg
ttctcctactgcgaccccggtgacgcccacgccgagcacctgcggctgctggagtgggag
aaggagatgctcgcgaaggtcgagctgccctaccgggtgatcgacgtcgcggcgggcgac
ctcggcgcgagcgcggcccgcaagtacgactgtgaggcgtgggtcccgacgcagggcacc
taccgcgaggtcacgtccacgtccaactgcaccgggttccaggcgcggcgcctcgcggtc
cggcaccgcgacgccgacggcaagaaccagccggtcgcgacgttgaacggcaccctcgcc
accacccgctggatcgtcgcgatcctggagaaccaccagcaggcggacggctcggtccgc
gtgcccgaggccctgcggaagttcctgggcctggaggtcctggagcccgtcaagcgctga
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