Actinomadura graeca: AGRA3207_004373
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Entry
AGRA3207_004373 CDS
T07938
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
agra
Actinomadura graeca
Pathway
agra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGRA3207_004373 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agra03021
]
AGRA3207_004373 (rho)
03019 Messenger RNA biogenesis [BR:
agra03019
]
AGRA3207_004373 (rho)
Transcription machinery [BR:
agra03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AGRA3207_004373 (rho)
Messenger RNA biogenesis [BR:
agra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AGRA3207_004373 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
NACHT
Spore_III_AA
AAA
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXJ23240
UniProt:
A0ABX8QWV1
LinkDB
All DBs
Position
complement(4940817..4942061)
Genome browser
AA seq
414 aa
AA seq
DB search
MSASTITEHSSTAEHKAHRAAQPARQKGRRSAAKQSAERAAAGTPATPPVPFHGILAVQD
KHAFVRTSGYLPGPDDVHVSLAQVKTYGLRPGDAVSGIAGPPKSNREKFASMASVETVNG
LSPEDAASRPEFAKLTPLFPEERLRLDTGPLATRVIDLVAPIGKGQRGLIVSPPKVGKTM
ILQAVAGAIAQNNPDVHLMVVLIDERPEEVTDLQRSVRGEVIHSTFDKPAQEHTALAELA
VERAKRLVEQGRDVVMLLDSITRLGRAYNLAAPSSSRILAGGVATTAIYPPKKFFGAARN
IENGGSLTILATALVETGSRMDDVFFEEYKGTGNMELKLDRGLADRRIFPAVDIEASGTR
REELLMSPEELALGRRLRRALQGLDRQQAVEQLLEKMKGTASNAEFLLRIQQTT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttccaccatcactgaacattccagtaccgcagagcacaaggcccacagggcc
gcccagcccgcccgccagaagggcaggcgctccgccgccaagcagtccgccgagcgcgcc
gccgccgggacgcccgcgaccccacccgtccccttccacgggatcctcgccgtccaggac
aagcacgcgttcgtgcgcacctccggctacctccccgggccggacgacgtgcacgtgtcc
ctcgcccaggtcaagacgtacgggctgcgccccggcgacgccgtgtccggcatcgcgggc
ccgccgaagtccaaccgggagaagttcgcctcgatggcgtcggtcgagacggtgaacggc
ctgtcccccgaggacgccgcctcccgccccgagttcgccaagctgacgccgctgttcccc
gaggagcgcctgcggctggacaccggcccgctcgccacccgcgtcatcgacctcgtcgcg
ccgatcggcaagggccagcgcgggctcatcgtgtcgccgccgaaggtcggcaagacgatg
atcctccaggccgtggcgggcgcgatcgcccagaacaaccccgacgtccacctcatggtc
gtgctcatcgacgagcggccggaggaggtcaccgacctccagcgctccgtccgcggcgaa
gtgatccactcgacgttcgacaagcccgcccaggagcacaccgcgctcgccgaactggcc
gtggagcgcgccaagcgcctcgtcgagcagggccgggacgtcgtcatgctgctcgactcg
atcacccggctcggccgcgcctacaacctcgcggcgccgtccagcagccgcatcctcgcc
ggcggtgtcgccacgaccgccatctaccccccgaagaagttcttcggcgccgcccgcaac
atcgagaacggcggctccctcaccatcctcgccaccgccctcgtcgagaccggctcccgc
atggacgacgtgttcttcgaggagtacaagggcaccggcaacatggagctcaagctcgac
cgcggcctggccgaccggcggatcttccccgccgtcgacatcgaggcgtccggcacccgc
cgcgaggagctgctgatgtcccccgaggagctcgccctcggccgccgcctccgccgcgcc
ctccagggcctcgaccggcagcaggccgtcgagcagctcctggagaagatgaagggcacc
gcgtccaacgcggaattcctcctccgcatccagcagacgacctga
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