Actinomadura graeca: AGRA3207_005947
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Entry
AGRA3207_005947 CDS
T07938
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
agra
Actinomadura graeca
Pathway
agra00300
Lysine biosynthesis
agra00470
D-Amino acid metabolism
agra01100
Metabolic pathways
agra01110
Biosynthesis of secondary metabolites
agra01120
Microbial metabolism in diverse environments
agra01230
Biosynthesis of amino acids
Module
agra_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
agra00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AGRA3207_005947
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AGRA3207_005947
Enzymes [BR:
agra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AGRA3207_005947
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QXJ24592
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All DBs
Position
complement(6741034..6742191)
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AA seq
385 aa
AA seq
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MALDDARDLTGRTGPTGLPDPTDLAGASYPAYVYDLAGLARHATAIRSALGGTELLYAAK
ANPDAEILRALAPCVDGVEVSSGGEMAHVRKALPDVPLAFGGPGKTDEELARALALGVHR
IHVESPGELTRLQHLGPAEVLLRANLPIDVPGAVLTMSGPFGMDEHALDECARRIASAPH
ITLWGIHAHLASGLDAPALLDVAGRITAWALPWLEARGVTEPEINLGGGMAVDYTDPTAR
FDWAAYGAGLSALSATLPPGTRLRVEPGRAVTAYHGRYVTDVLDVKSTRGETYVILRGGT
HHLRTPAAKGHDQPFEVLAPRSGPAAKATLVGQLCTPKDVFARDVPVPPLEPGDVIAFTM
AGAYAWNISHHDFLMHPRPAFHYLR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggccctggacgacgcccgcgacctgaccggccgcaccggtcccaccggtctgcccgat
cccacggacctcgccggggcgtcctacccggcctacgtctacgacctcgccgggctggcc
cgtcacgccaccgccatccggtccgcgctcggcgggaccgagctgctctacgccgccaag
gcgaacccggacgcggagatcctccgcgccctggcgccctgcgtcgacggcgtcgaggtc
tcctccggtggggagatggcccacgtccggaaggccctcccggacgtccctctcgcgttc
ggcggacccggcaagaccgacgaggagctggcgcgcgccctcgcgctcggcgtccaccgg
atccacgtcgagagcccgggagagctgacgcggctgcaacacctcggcccggccgaggtg
ctcctcagggccaacctgcccatcgacgtgccgggcgccgtgctcaccatgagcggcccc
ttcggcatggacgagcacgcgctggacgaatgcgcccgccgcatcgcctcggcaccgcac
atcaccctctgggggatccacgcccacctggcgtccgggctggacgccccggcgctgctc
gacgtggcgggccgcatcaccgcgtgggcgctcccctggctggaggcccgcggcgtcacc
gaaccggagatcaacctcggcggcggcatggccgtcgactacaccgaccccaccgcccgc
ttcgactgggcggcctacggcgccgggctctccgcgctctccgccacgctgccgcccggc
acgcggctccgggtcgaaccgggccgcgccgtcaccgcctaccacggccgctacgtcacc
gacgtgctggacgtcaagtccacgcgcggcgagacgtacgtgatcctgcggggcgggacg
catcacctgcggacgcccgccgccaagggccacgaccagcccttcgaggtcctcgccccg
aggagcgggcccgccgcgaaggccaccctcgtcgggcagctctgcaccccgaaggacgtc
ttcgcgcgcgacgtgcccgtcccgcctctggagccgggtgacgtcatcgccttcaccatg
gccggggcctacgcctggaacatctcccatcacgacttcctgatgcacccccgcccggcg
ttccactacctgcgctga
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