Actinomadura graeca: AGRA3207_006439
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Entry
AGRA3207_006439 CDS
T07938
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
agra
Actinomadura graeca
Brite
KEGG Orthology (KO) [BR:
agra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
agra03009
]
AGRA3207_006439 (rimO)
Enzymes [BR:
agra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AGRA3207_006439 (rimO)
Ribosome biogenesis [BR:
agra03009
]
Prokaryotic type
ribosomal protein modification factors
AGRA3207_006439 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QXJ25007
LinkDB
All DBs
Position
7267131..7268552
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AA seq
473 aa
AA seq
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MPIRRKVSLITLGCARNEVDSEELAARIEDAGWDLADGDASGADVVVVNTCGFIEAAKKD
SIDTLLAAHDSGAKVVAAGCMAERYGKELAEALPEAHAVIGFDDYTAIGERLDEVMAGRP
REAHTPRDRRKLLPISPVERTTAGAAVAIPGHGGHDDLPDGVAPASGPRVLRRRLGGGPV
APLKLASGCDRRCTFCAIPAFRGAYVSRPPAEVLEEARWLAGHGVRELVLVSENSTSYGK
DLGDLRALEGLLPALAAVDGVERVRVSYLQPAETRPGLIEAICGTPGVAPYFDLSFQHAS
GPVLRAMRRFGDRERFLDLLGQIRAQAPEAGVRSNFIVGFPGETEEDFEELVAFLSAARL
DAVGVFGYSDEDGTEAAGLDGKLDLDEVARRVEELSGLAEELTAQRAEDRVGSRVRVLLE
EDAGGGAFEGRAEHQAPEVDGTVLVRGPGLTAGDIVTALVTGSDGVDLVADVS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcccatacgccgcaaggtctcactcatcacgctcggctgcgcccgcaacgaggtcgac
tccgaggagctcgccgcccgcatcgaggacgccggctgggacctggccgacggcgacgcg
tccggcgccgacgtggtggtggtcaacacctgcggtttcatcgaggcggcgaagaaggac
tccatcgacacgctgctggcggcgcacgactccggagcgaaagtcgtcgcggcgggctgc
atggccgagcggtacggcaaggagctggccgaggcccttccggaggcccacgcggtgatc
ggcttcgacgactacaccgccatcggcgagcggctggacgaggtgatggcgggccggccc
cgcgaggcccacaccccgcgggaccggcggaagctgctgccgatcagcccggtcgagcgc
accacggccggcgccgcggtggcgatccccgggcacggcgggcacgacgacctgcccgac
ggcgtggcgcccgcgtccggcccccgggtgctgcggcggcgtctcggcggcggtccggtc
gccccgctgaagctggcgtccggctgcgaccggcggtgcacgttctgcgcgatccccgcg
ttccgcggcgcgtacgtgtcacggcccccggcggaggtgctggaggaggcgcgctggctg
gccgggcacggcgtgcgcgagctcgtcctcgtcagcgagaactccacgtcctacggcaag
gacctcggcgacctgcgggccctggaggggctgctcccggccctcgccgccgtcgacggc
gtcgaacgcgtccgggtgagctacctccagcccgccgagacccgcccggggctcatcgag
gcgatctgcggcacgcccggcgtcgcgccgtacttcgacctgtcgttccagcacgcgagc
ggccccgtgctccgcgcgatgcggcgcttcggcgaccgcgagcggttcctggacctgctc
ggccagatccgcgcgcaggcgcccgaggcgggcgtgcgctccaacttcatcgtcggcttc
cccggcgagaccgaggaggacttcgaggagctggtggcgttcctgtccgcggcgcggctg
gacgcggtcggcgtgttcggctactccgacgaggacggcaccgaggccgcggggctggac
ggcaagctcgacctggacgaggtcgcccgccgcgtcgaggagctgtcgggcctcgccgag
gagctgaccgcgcagcgcgccgaggaccgcgtgggctcgcgggtccgggtcctgctggag
gaggacgccgggggcggcgcgttcgagggacgcgccgagcaccaggcgcccgaggtggac
gggacggtcctcgtgcgcggccccggcctcaccgccggcgacatcgtcacggccctggtg
accggcagcgacggcgtggacctcgtcgcggacgtgtcatga
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