Actinomadura graeca: AGRA3207_006462
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Entry
AGRA3207_006462 CDS
T07938
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
agra
Actinomadura graeca
Pathway
agra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AGRA3207_006462 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agra03019
]
AGRA3207_006462 (rny)
Messenger RNA biogenesis [BR:
agra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AGRA3207_006462 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
FAM176
Med28
EMC3_TMCO1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QXJ25029
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Position
7295481..7297052
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AA seq
523 aa
AA seq
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MESVLLGAALLVTLVALVIVVLRRPGMPGRAAAEMARAHSEADEARARAERDAQAVLEKA
EGQARRIAAETRAELEEEGRALREDLRTLREDLERRESRLAEREQRLDGEFRRLEEWSGR
LAEGKRALEGRKQELAKVEEERRQVLERAAGLTAEQAKGELVTAIENQAKREAIPITREI
ENSARAEGEKRARKIVTLAIQRVASEQTAESVVSVLHLPSDEMKGRIIGREGRNIRAFET
TTGVNLIIDDTPEAVLLSCFDPVRREVGRLTLEKLVLDGRIHPQRIEEIYERSKSDVEQL
CVRAGEDALVEVGIADMHPELIALLGQLRYRTSYGQNVLKHLIESAHIAGIMASELRLPV
DVAKRCTLLHDIGKALTHEVEGSHALIGAEIARRYGEDEDVVHAIEAHHNEVEVRTVEAV
LTQAADAVSGSRPGARRESLEAYVKRLERLEEIARDRHEGVEKVFAMQAGREIRVMVKPD
SVDDIQAQVIARDIAKQVEDELTYPGQIRVTVVRESRAIEFAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtcctgctgggtgcagcgctgctggtgaccctggtcgctctcgtcatcgtc
gtcctccgccggcccggcatgccgggccgggcggcggcggagatggcccgggcgcacagc
gaggcggacgaggcgcgggccagggccgagcgggacgcgcaagccgtcctggagaaggcc
gaggggcaggcgcggcggatcgcggcggagacgcgcgcggagctggaggaggagggccgg
gccctccgggaggacctgcggacgctcagggaggatctggagcgccgggagagccgcctc
gccgagcgggagcagcgcctggacggggagttccggcggctggaggagtggtccggccgt
ctcgccgagggcaagcgggcgctggagggccgcaagcaggagctggccaaggtcgaggag
gagcggcggcaggtcctggagcgcgcggcggggctcaccgccgagcaggccaagggcgaa
ctggtcaccgcgatcgagaaccaggccaagcgcgaggccatcccgatcacccgggagatc
gagaactcggcgcgggccgagggcgagaagcgcgcccgcaagatcgtgacgctggcgatc
cagcgggtcgcgagcgagcagaccgccgagtcggtggtgtcggtgctgcaccttccgagc
gacgagatgaaaggccgcatcatcgggcgcgagggacgcaacatccgcgccttcgagacg
accaccggcgtgaacctcatcatcgacgacacccccgaggcggtcctgctgagctgcttc
gacccggtgcgccgggaggtcggcaggctgaccctggagaagctcgtcctggacgggcgc
atccacccgcagcggatcgaggagatctacgagcgcagcaagagcgacgtcgagcagctg
tgcgtgcgggcgggcgaggacgcgctggtcgaggtcggcatcgccgacatgcacccggag
ctcatcgccctgctgggccagctccgctacaggacgtcctacgggcagaacgtcctgaag
cacctgatcgagtccgcgcacatcgccgggatcatggcgagcgagctgcggctgcccgtg
gacgtggccaagcggtgcacgctgctgcacgacatcggcaaggcgctcacccatgaggtg
gagggcagtcacgcgctgatcggagcggagatcgcgcgccgctacggcgaggacgaggac
gtggtccacgcgatcgaggcgcaccacaacgaggtcgaggtgcggacggtggaggccgtg
ctcacccaggccgcggacgccgtcagcggcagccgcccgggcgcgcgcagggagtccctg
gaggcgtacgtcaagcggctggagcggctggaggagatcgcccgggacaggcacgagggc
gtggagaaggtcttcgcgatgcaggcgggccgggagatccgtgtgatggtgaagcccgac
tcggtggacgacatccaggcgcaggtcatcgcgcgggacatcgcgaagcaggtcgaggac
gagctgacctacccggggcagatccgcgtgaccgtggtgcgggagtcacgggccatcgag
ttcgcccgctga
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