KEGG   Actinomadura graeca: AGRA3207_006462
Entry
AGRA3207_006462   CDS       T07938                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
agra  Actinomadura graeca
Pathway
agra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:agra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AGRA3207_006462 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agra03019]
    AGRA3207_006462 (rny)
Messenger RNA biogenesis [BR:agra03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AGRA3207_006462 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B FAM176 Med28 EMC3_TMCO1 Exonuc_VII_L
Other DBs
NCBI-ProteinID: QXJ25029
LinkDB
Position
7295481..7297052
AA seq 523 aa
MESVLLGAALLVTLVALVIVVLRRPGMPGRAAAEMARAHSEADEARARAERDAQAVLEKA
EGQARRIAAETRAELEEEGRALREDLRTLREDLERRESRLAEREQRLDGEFRRLEEWSGR
LAEGKRALEGRKQELAKVEEERRQVLERAAGLTAEQAKGELVTAIENQAKREAIPITREI
ENSARAEGEKRARKIVTLAIQRVASEQTAESVVSVLHLPSDEMKGRIIGREGRNIRAFET
TTGVNLIIDDTPEAVLLSCFDPVRREVGRLTLEKLVLDGRIHPQRIEEIYERSKSDVEQL
CVRAGEDALVEVGIADMHPELIALLGQLRYRTSYGQNVLKHLIESAHIAGIMASELRLPV
DVAKRCTLLHDIGKALTHEVEGSHALIGAEIARRYGEDEDVVHAIEAHHNEVEVRTVEAV
LTQAADAVSGSRPGARRESLEAYVKRLERLEEIARDRHEGVEKVFAMQAGREIRVMVKPD
SVDDIQAQVIARDIAKQVEDELTYPGQIRVTVVRESRAIEFAR
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggagagcgtcctgctgggtgcagcgctgctggtgaccctggtcgctctcgtcatcgtc
gtcctccgccggcccggcatgccgggccgggcggcggcggagatggcccgggcgcacagc
gaggcggacgaggcgcgggccagggccgagcgggacgcgcaagccgtcctggagaaggcc
gaggggcaggcgcggcggatcgcggcggagacgcgcgcggagctggaggaggagggccgg
gccctccgggaggacctgcggacgctcagggaggatctggagcgccgggagagccgcctc
gccgagcgggagcagcgcctggacggggagttccggcggctggaggagtggtccggccgt
ctcgccgagggcaagcgggcgctggagggccgcaagcaggagctggccaaggtcgaggag
gagcggcggcaggtcctggagcgcgcggcggggctcaccgccgagcaggccaagggcgaa
ctggtcaccgcgatcgagaaccaggccaagcgcgaggccatcccgatcacccgggagatc
gagaactcggcgcgggccgagggcgagaagcgcgcccgcaagatcgtgacgctggcgatc
cagcgggtcgcgagcgagcagaccgccgagtcggtggtgtcggtgctgcaccttccgagc
gacgagatgaaaggccgcatcatcgggcgcgagggacgcaacatccgcgccttcgagacg
accaccggcgtgaacctcatcatcgacgacacccccgaggcggtcctgctgagctgcttc
gacccggtgcgccgggaggtcggcaggctgaccctggagaagctcgtcctggacgggcgc
atccacccgcagcggatcgaggagatctacgagcgcagcaagagcgacgtcgagcagctg
tgcgtgcgggcgggcgaggacgcgctggtcgaggtcggcatcgccgacatgcacccggag
ctcatcgccctgctgggccagctccgctacaggacgtcctacgggcagaacgtcctgaag
cacctgatcgagtccgcgcacatcgccgggatcatggcgagcgagctgcggctgcccgtg
gacgtggccaagcggtgcacgctgctgcacgacatcggcaaggcgctcacccatgaggtg
gagggcagtcacgcgctgatcggagcggagatcgcgcgccgctacggcgaggacgaggac
gtggtccacgcgatcgaggcgcaccacaacgaggtcgaggtgcggacggtggaggccgtg
ctcacccaggccgcggacgccgtcagcggcagccgcccgggcgcgcgcagggagtccctg
gaggcgtacgtcaagcggctggagcggctggaggagatcgcccgggacaggcacgagggc
gtggagaaggtcttcgcgatgcaggcgggccgggagatccgtgtgatggtgaagcccgac
tcggtggacgacatccaggcgcaggtcatcgcgcgggacatcgcgaagcaggtcgaggac
gagctgacctacccggggcagatccgcgtgaccgtggtgcgggagtcacgggccatcgag
ttcgcccgctga

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