Actinomadura graeca: AGRA3207_006907
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Entry
AGRA3207_006907 CDS
T07938
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
agra
Actinomadura graeca
Pathway
agra03030
DNA replication
agra03430
Mismatch repair
agra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AGRA3207_006907 (dnaE)
03430 Mismatch repair
AGRA3207_006907 (dnaE)
03440 Homologous recombination
AGRA3207_006907 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agra03032
]
AGRA3207_006907 (dnaE)
03400 DNA repair and recombination proteins [BR:
agra03400
]
AGRA3207_006907 (dnaE)
Enzymes [BR:
agra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AGRA3207_006907 (dnaE)
DNA replication proteins [BR:
agra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AGRA3207_006907 (dnaE)
DNA repair and recombination proteins [BR:
agra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AGRA3207_006907 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
B1
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QXJ25418
LinkDB
All DBs
Position
7787025..7790555
Genome browser
AA seq
1176 aa
AA seq
DB search
MADSFVHLHVHTEYSMLDGAARLKQMFDEVSRQKMPAIAMTDHGNMHGAYDFHRQATAAG
VTPIIGIEAYMAPESRFHKKKVQWGEPSQKRDDVSGGGLINHMTLWARDRNGLHNLFKLS
SRAYTEGFVFKYARMDEELLAEHADGLMATTGCPSGKVQTRLRLGQFDEALKAAANFQDI
LGKDNYFLELMDHGLDIERRVRQGLIDIGKKLNIRPVVTNDSHYTHESEATAHDALLCVQ
VGKQLADPDRFRFDGSGYYIKTADEMRAIDSSDVWQEGCKNTLLIAERVDPAGMFEYRDL
SPRFPVPEGETEETWFRKEVWKGLERRFPDGLPDGYQKQAEYEMGVILGKGYPSYFLVVA
DFIMWAKENGILVGPGRGSAAGSLIAYAMGITDLDPIPHGLIFERFLNPERASMPDIDID
FPEDRRAEVIRYTTEKWGADKVSFIATFGTIKAKAAIKDAGRVLGFPYALGDRISKAFPP
AVMGKDIPLSGIFDDKHPRHGEAGELRKLYEEETDVKQIMDLAQGLEGLIRQTGVHAAGI
IMSGETITDHVPIMRRDADGAIITQFDYPTCETLGLLKMDFLGLRNLTIIDDALKGIKKN
KGVEVDLLALPLDDQPTYDLLARGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVGALYR
PGPMGANSHTNYALRKNGQQEITPIHPELEEPLREILDTTYGLIVYQEQVMAIAQKVAGY
TLGKADLLRRVMGKKKKAELDAQFVGFEQGMIDNGFSKEAVKTLWDILVPFSDYAFNKAH
SAAYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKSALYLSECRRMGLKVLPPDVNTSE
ADFTPLGDTEIRFGLSAVRNVGTNVVDGIVAARREKGAYADFNDFLNKVPPIVCNKRVVE
SLIKAGGFDELGHQRKALLMVHEQAIDSVIDIKRKEAIGQDSLFGALEDDGGDDAFAVAI
PEGEEWDKTTLLAFEREMLGLYVSDHPLLGVEHILEREADCTIAVLNGGERPDGQVVIVA
GLLSGLQRKVTKQGNSWAMFQLEDLGGSIEVMCFPSSYQLCSTLLAEDAILVVKGRLDRR
EDVAKIIAMEVTQPDLTITDATGPLSVTLPLGRCTPPTVTRLKEVLITHPGTAEVHLHLQ
NGPRTTVVRLDDKLRVAPSPALMGDLKQLLGPSCLS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcgttcgttcatctgcacgtccatacggagtactccatgctggacggcgcc
gcccggctgaagcagatgttcgacgaggtctcccgccagaagatgccggccatcgccatg
accgaccacggcaacatgcacggcgcctacgacttccaccggcaggcgacggccgcgggc
gtgaccccgatcatcggcatcgaggcgtacatggcgcccgagtcgcgctttcacaagaag
aaggtccagtggggggagccgagccagaagcgcgacgacgtctccggcggcggcctcatc
aaccacatgacgctgtgggcgcgcgacaggaacggcctgcacaacctgttcaagctgtcc
agccgcgcctacaccgagggcttcgtcttcaagtacgcgcggatggacgaggaactgctc
gccgagcacgccgacggcctgatggccacgacgggctgcccgtcagggaaggtgcagacg
cggctgcggctcggccagttcgacgaggcgctcaaggcggcggcgaacttccaggacatc
ctcggcaaggacaactacttcctggagctgatggaccacggcctcgacatcgagcgccgc
gtccggcagggcctcatcgacatcggcaagaagctgaacatccggccggtcgtcaccaac
gactcgcactacacgcacgagtcggaggccaccgcccacgacgcgctgctctgcgtccag
gtgggcaagcagctcgccgaccccgaccggttccggttcgacggcagcggctactacatc
aagaccgccgacgagatgcgggcgatcgactcctccgacgtctggcaggagggctgcaag
aacaccctgctgatcgccgagagggtcgacccggcgggcatgttcgagtaccgcgacctc
agcccccgcttccccgtccccgagggcgagacggaggagacctggttccgcaaggaggtc
tggaaggggctggagcggcgcttccccgacgggctgcccgacggctaccagaagcaggcc
gagtacgagatgggcgtcatcctcggcaaggggtacccgtcgtacttcctcgtcgtcgcc
gacttcatcatgtgggccaaggagaacggcatcctcgtcggccccggccgcggcagcgcc
gcggggtcgctgatcgcctacgcgatgggcatcaccgacctcgacccgatcccgcacggg
ctgatcttcgagcggttcctcaaccccgagcgcgcgtccatgcccgacatcgacatcgac
ttccctgaagaccggcgggccgaggtcatccgctacaccaccgagaagtggggcgcggac
aaggtctccttcatcgccacgttcggcaccatcaaggcgaaggccgccatcaaggacgcc
ggccgcgtcctcggcttcccctacgccctcggcgaccgcatctccaaggcgttcccgccc
gccgtcatgggcaaggacatcccgctgtcgggcatcttcgacgacaagcacccgcgccac
ggcgaggccggtgagctgcggaagctgtacgaggaggagaccgacgtcaagcagatcatg
gatctggcgcagggcctggaggggctgatccgccagaccggcgtgcacgccgcggggatc
atcatgtccggtgagacgatcaccgaccacgtcccgatcatgcgccgggacgccgacggc
gcgatcatcacgcagttcgactacccgacctgcgagacgctcggcctgctgaagatggac
ttcctgggcctgcgcaacctgacgatcatcgacgacgcgctgaagggcatcaagaagaac
aagggcgtcgaggtcgacctgctcgccctgccgctggacgaccagccgacctacgacctc
ctcgcccgcggcgacaccctcggggtcttccagttcgacggcggcccgatgcgctcgctg
ctgcggctgatgaagcccgacaacttcgaggacatctccgccgtcggcgccctgtaccgg
cccggcccgatgggcgccaactcccacaccaactacgcgctccgcaagaacggccagcag
gagatcacgccgatccaccccgagctggaggagccgctcagggagatcctcgacaccacc
tacggcctgatcgtctaccaggagcaggtcatggccatcgcgcagaaggtggcggggtac
acgctcggcaaagcggacctgctccgccgcgtcatgggcaagaagaagaaggccgagctg
gacgcccagttcgtcggcttcgagcagggcatgatcgacaacggcttctccaaggaggcc
gtcaagacgctgtgggacatcctcgtccccttctccgactacgccttcaacaaggcccac
tccgccgcgtacgggctggtctcctactggacggcctacctcaaggccaactacccggcc
gagtacatggcgggcctgctcacctccgtcggcgacgacaaggacaagagcgccctctac
ctgtcggaatgccgccggatgggcctgaaggtgctgccgccggacgtcaacacctccgag
gccgacttcacgccgctcggcgacaccgagatccgcttcgggctgtccgccgtccgcaac
gtgggcaccaacgtggtggacggcatcgtcgcggcccgccgcgagaagggcgcctacgcc
gacttcaacgacttcctcaacaaggtcccgccgatcgtctgcaacaagcgcgtcgtggag
tcgctgatcaaggcgggcggcttcgacgagctcggccaccagcgcaaggcgctgctgatg
gtgcacgagcaggccatcgactcggtcatcgacatcaagcgcaaggaggccatcggccag
gactcgctgttcggcgccctggaggacgacggcggcgacgacgcgttcgccgtcgcgatc
cccgagggcgaggagtgggacaagaccaccctcctcgccttcgagcgggagatgctcggc
ctgtacgtctccgaccacccgctcctcggcgtcgagcacatcctggaacgcgaggccgac
tgcacgatcgccgtgctgaacgggggcgagcgccccgacggccaggtcgtgatcgtcgcg
gggctgctgtcgggcctgcagcgcaaggtcaccaagcagggcaactcgtgggcgatgttc
cagctggaggacctcggcggctccatcgaggtgatgtgcttcccctcgtcctaccagctg
tgctccaccctcctcgccgaggacgcgatcctcgtcgtcaagggacgcctggaccgccgc
gaggacgtcgcgaagatcatcgcgatggaggtcacccagcccgacctcaccatcaccgac
gccaccggcccgctgtcggtcaccctgcccctcggccgctgcaccccgccgaccgtcacg
cgcctcaaggaagtgctgatcacccaccccggcaccgccgaggtgcacctgcacctgcag
aacggcccgcgcaccaccgtcgtccgcctggacgacaagctccgcgtcgccccgtcaccc
gcgctcatgggcgacctcaagcaactcctgggcccgtcctgcctgagctga
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