KEGG   Agrobacterium sp. CGMCC 11546: GSF67_00790
Entry
GSF67_00790       CDS       T10431                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
agrc  Agrobacterium sp. CGMCC 11546
Brite
Enzymes [BR:agrc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GSF67_00790
    5.6.2.6  RNA 3'-5' helicase
     GSF67_00790
DNA repair and recombination proteins [BR:agrc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GSF67_00790
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: QKW95766
LinkDB
Position
1:153780..156299
AA seq 839 aa
MNHIESPTSGTHVGTLPLPFQKWFVEKGWSPRAHQLELMARARGGENMLLIAPTGAGKTL
GGFMASLTDLAERGKVPPGSGFVGVHTLYISPLKALAVDIERNLTRPVSEMGLPIVIETR
TGDTPQAKRQRQKVKPPDILLTTPEQVSLLLANKEAERFFRDLKYVVLDELHSLVTSKRG
HLLSLALARVRRHAPDVRFIGLSATVAEPMDLRRYLAPQGQGEPPAGLITVEGGAKPDIS
ILHTEERIPWSGHSARYAGKDLYEALKQHQTTLVFVNTRSQAERVFQELWTVNDDNLPIA
LHHGSLDAGQRRRVEAAMAENKLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRI
GRSNHRMDEPSKAILVPANRFEVMECRAALDANYIGAQDTPPIAEGALDVLAQHVLGMAC
AEPFDADELYREVTSASPYADLPRATFDRVVDFTATGGYALRTYERYARIRQMKDGRWRV
SNPAVAQQYRLNLGTIVEAAELNVRMVKRNAKGTVGRGGMSLGKVEEYFLEQLVQGDTFL
FAGKVLRFEGIRENECLVSQAFSMDPKIPSYAGGKFPLSTYLADQVRSMLADPARWQALP
DQVRDWLEIQKEKSIIPKRDELLVETFPFRKRFFMVMYPFEGRLAHQTLGMLLTRRLERA
GAKPMGFVATDYSLAIWAMEDIGMRLKSRRLSLADLLDEDMLGDDLEAWLDESFMLKRTF
RNCAVISGLIERRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILLEATRRDAAAGLLDIG
RLGDMLKRIKGHTTHRALEHVSPLAVPVMLEIGRETVAGEAMDDVLAEAADELIAEAMS
NT seq 2520 nt   +upstreamnt  +downstreamnt
gtgaaccatatcgagtcccccacgtccggcacgcatgtcggcaccttgccccttccattc
cagaaatggtttgtagaaaagggatggtctccgcgcgcccatcagctagaattgatggcg
cgggcgcggggcggtgaaaacatgctgctgatcgcgccgacgggggccggcaagacgctc
ggcggttttatggcgtcgctcaccgatctggcggagcgcggcaaggtgccgcccggctcc
ggttttgtcggcgtgcacacgctctatatttcgcctctgaaggcgcttgcagtggatatc
gagcgcaatctcaccagacccgtttccgaaatgggcctgccgattgtgatcgaaacccgc
acgggcgatacgccgcaggccaaacgccagcgccagaaggtgaagccacccgatatactg
ctgacaacaccggagcaggtctcgctgctgcttgccaataaggaagccgagcggtttttc
cgcgatctgaaatatgtggttcttgacgaactgcattccctcgtcacttccaaacgcggc
cacctgctgtcgctggcgctcgcacgggtgcgtcggcacgctcctgacgtgcgcttcatc
ggcctttcggccacggtggcggagccgatggatctgcgtcgttaccttgcgccacagggg
caaggtgagccgccggccggcctcatcacggtggagggcggagcaaaaccggacatttcc
attttgcacacggaagaacgcattccgtggtctggccactccgcgcgttatgccggcaag
gacttatacgaggcgttgaagcagcatcagacgacactggtcttcgtcaacacgcgctca
caggccgaacgggtcttccaggaactgtggaccgtcaatgacgacaatctgccgattgcg
ctgcatcacggctcgctggatgccggccagcgccgcagggtggaggcggccatggcggag
aacaagttgcgcgccgtcgttgccacctcgacgctggatctcggcatagactggggcgat
gtcgacctcgtcgtgcatgtcggtgcgcctaaaggggcaagccgccttgcccagcgcatc
ggccgttccaatcaccgcatggacgagccgtcaaaggcgatcctcgttcccgccaaccgt
ttcgaggtgatggagtgccgggcagcgctggatgccaattacatcggcgcgcaggatacg
ccgccgattgccgaaggcgcgctcgatgttctggcccagcatgtgctcggcatggcctgc
gccgaacccttcgatgcggatgaactttatcgcgaagtcaccagcgcctcgccctatgcc
gacctgccgcgcgctaccttcgaccgggtggtggatttcaccgcgacaggcggttacgcg
ctacgcacctatgagcgttatgcccgcatccgccagatgaaggatggccgctggcgcgtt
tccaatccggctgtcgcccagcaatatcgcctgaacctcggcaccatcgtcgaggcggcg
gaactcaatgtccgcatggtcaagcgcaatgccaagggcacggtcgggcgcggcggcatg
tcgctcggcaaggtcgaggaatatttcctcgagcagctggtgcagggcgatacattcctg
ttcgccggcaaggttctgcgcttcgaaggcatccgcgagaatgaatgcctggtgtcgcaa
gccttttccatggacccgaaaataccctcctatgctggcggcaagtttccgctttccacc
tatttggcggatcaggtgcgctccatgcttgccgatcccgcccgctggcaggcgctgccg
gatcaggtccgcgactggctggaaatccagaaggaaaagtcgatcattcccaagcgcgac
gagttgctggtggagacattcccgttccgcaaacgcttcttcatggtcatgtatcccttc
gagggacggctggcgcaccagacgctcggcatgcttctgacgcggcggctggagcgcgcg
ggcgcaaaaccgatgggtttcgtcgccaccgattactcgctcgccatatgggccatggag
gatatcggaatgcggctgaaatcccgccgcctgtcgctggcggaccttctcgacgaggac
atgctgggcgacgatctggaggcgtggctggatgagtccttcatgctgaaacgcacgttt
cgcaattgcgcagtcatctctggcctcatcgagcgccgtcatccgggcaaggaaaagacc
ggccggcaggtcacggtctccgccgatcttatctatgacgttcttcgcagccatgagccg
gatcatatcctgctggaagccacgcggcgggatgcggcggcgggacttttggacattggc
cgtcttggcgatatgctgaagcgaatcaagggccacaccacccatcgcgcgctggagcat
gtctcgccgctcgccgttccggtgatgctggaaatcggccgcgaaacggtggcaggcgag
gcgatggacgatgtgctggccgaagcggccgacgagctgatcgccgaagccatgtcctga

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