Agrobacterium sp. CGMCC 11546: GSF67_01615
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Entry
GSF67_01615 CDS
T10431
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
agrc Agrobacterium sp. CGMCC 11546
Pathway
agrc00030
Pentose phosphate pathway
agrc01100
Metabolic pathways
agrc01120
Microbial metabolism in diverse environments
agrc01200
Carbon metabolism
Module
agrc_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
GSF67_01615 (edd)
Enzymes [BR:
agrc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
GSF67_01615 (edd)
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
QKW95908
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Position
1:complement(297229..299049)
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AA seq
606 aa
AA seq
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MSADSRIQAITARIVERSKPYRETYLERLRLQVSKGVHRSVLSCGNLAHGFAVCSPADKD
ILAGDRVPNLGIITAYNDMLSAHQPYETFPAIIRDAAKEAGGIAQVAGAVPAMCDGVTQG
QPGMELSLFSRDAIAMAAGIGLSHNMFDAAVYLGVCDKIVPGLVIAALAFGHLPAVFVPA
GPMTSGLPNDEKSRIRQLYAEGKVGRAELLEAESKSYHGPGTCTFYGTANSNQMLMEIMG
FHMPGSSFINPGTPLRDALTREAAKRALAITAQGNEFTPAGEMIDERSVVNGVVGLHATG
GSTNHTMHLIAMARAAGIILTWQDISDLSDIVPLLARVYPNGLADVNHFHAAGGMGFLIK
QLLKQGFVHDDVRTVFGQGLSAYTVDAMLDEKGAVTRQPSPEQSHDPKVLSSIETPFQST
GGLKMLTGNLGKSVIKISAVKPERHIIEAPAIVFHDQQELQDAFKEGKLNRDFIAVVRFQ
GPKANGMPELHRLTPPLGVLQDRGFKVALVTDGRMSGASGKVPAAIHVTPEASDCGPISL
IRDGDIIRLDAISGTLEVLVSAAELAKREPARADLSGNEWGMGRELFAPFRRNAGPADQG
ASVLFH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgattcccgcattcaggcgattaccgcccgcatcgtcgaacgttccaagccc
taccgcgagacctatctcgagcggctgcggctgcaggtctctaagggcgttcaccgttcc
gttctgtcctgcggcaatcttgcgcatggatttgccgtctgttcccccgccgacaaggac
atccttgccggcgaccgggttcccaatctcggcatcataaccgcctataacgacatgctg
tcggcgcaccagccctacgagaccttcccggcgatcatccgtgatgcggcgaaggaagcg
ggcggcatcgcgcaggtagcgggcgcggttcccgccatgtgcgacggcgtgacccagggc
cagcccggcatggagctttcgctgttttcccgcgatgccattgccatggcagccggcata
ggcctgtcgcacaacatgttcgacgccgccgtctatctcggcgtttgtgacaagatcgtg
cccggcctcgtcatcgccgcgctcgcctttggccacctgcccgccgtcttcgttcccgcc
ggtccaatgacatctggcctgccgaatgacgaaaaatcccgcattcgccagctttatgcc
gaaggcaaggtcggccgcgccgagctgctggaggcggaatccaagtcctatcacggcccc
ggcacctgcaccttctacggcaccgccaattcgaaccagatgctgatggagatcatgggt
ttccatatgcccggttcgtccttcatcaatcccggcacaccgctgcgtgatgcactcacc
cgtgaagcagccaagcgcgcgctggcgatcaccgcgcagggcaatgaattcacgccggcg
ggcgagatgatcgacgaaagatccgtcgtcaacggcgtcgtcggcctgcatgcgacgggt
ggctccaccaaccacaccatgcacctgatcgccatggcgcgcgccgccggcatcattctc
acctggcaggatatttccgatctttccgacatcgtgccgctgctcgcccgcgtttatccc
aacgggcttgcagacgtgaaccatttccatgccgccggcggtatgggcttcctcatcaag
cagctgctgaagcagggctttgtgcatgatgatgtgcgaaccgtcttcggacaggggctt
tcggcctacaccgtggatgccatgcttgacgagaagggtgcagtcacccgccagccctcc
cccgaacagagccatgacccgaaggttctgtccagcatcgaaacgccgttccagtcgacc
ggcggcctgaagatgctgaccggcaatctcggcaaatcggtgatcaagatttcggccgtc
aagccggaacgccacatcatcgaagcaccggcgatcgttttccatgatcagcaggaactt
caggacgcgttcaaggagggcaagctcaaccgtgacttcattgcggttgtccgcttccag
gggccgaaggccaatggcatgccggaactgcaccgcctgacgccgccgctcggcgtgctg
caggaccgcggcttcaaggtggcgctggtgactgacgggcgtatgtcaggcgcatccggc
aaggtgccggctgccattcacgtcacgccggaagcctccgattgcggcccgatctcgctt
atccgcgatggcgacatcatccgtctcgacgccatttccggaacgctggaagtgctggtt
tccgccgccgagctggcaaaacgtgaaccggcgcgtgccgatctttccggcaatgaatgg
ggcatgggccgcgaacttttcgcccccttccgccgcaatgccggcccggccgatcagggc
gccagcgttctcttccattga
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