Agrobacterium sp. CGMCC 11546: GSF67_04745
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Entry
GSF67_04745 CDS
T10431
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
agrc Agrobacterium sp. CGMCC 11546
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrc03400
]
GSF67_04745
Enzymes [BR:
agrc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GSF67_04745
DNA repair and recombination proteins [BR:
agrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GSF67_04745
Prokaryotic type
GSF67_04745
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Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
HAD
Phage_Bbp19
Motif
Other DBs
NCBI-ProteinID:
QKW96457
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Position
1:complement(920221..921660)
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AA seq
479 aa
AA seq
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MSLKTAPVIVWFRKDLRLSDNLALLAAVEHGGPVIPVYIREKSAGPLGGAQEWWLHHSLA
ALSSSLEKAGGRLVLASGDAERILRDLISETGADTVVWNRRYDPTGMATDKAFKQKLRDD
GLTVQSFSGQLLHEPSRLQTKSGGPYRVYTPFRRALEGGEEPHAPADAPKSLKAPEVWPK
SEKLADWKLLPTKPDWAKDFSDIWTPGENGAKDKLDDFIDGALKGYEEGRDFPAKPATSL
LSSHLAAGEISPAAVWHATKGLSRHIASNDISRFRKEIVWREFCYHLLFHFPELDEKNWN
DSFDAFPWRDDETSFKAWTRGMTGYPIVDAGMRQLWQHGIMHNRVRMIVASFLIKHLLID
WRKGEKWFRDTLVDADPASNAANWQWVAGSGADASPFFRIFNPILQGEKFDGDGDYVRRF
VPELEKLERKYIHKPFEAPKDVLKKAGVELGKTYPLPIVDHGKARERALAAYAAVKKTT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaaaaaccgcccccgtcatcgtctggttccgcaaggatctgcgtctttctgac
aatcttgctttgctcgccgcagtggagcatggcgggccagttattccggtctacatcagg
gaaaaatccgccggtcccttagggggtgcgcaggaatggtggctccaccattcgcttgcc
gctctctcctcctcgcttgaaaaagccggcggccgcctggtgctcgcaagcggcgatgca
gagaggatactgcgtgacctgatatccgaaaccggggcagacaccgtggtctggaaccgc
cgttatgatccgaccggcatggccaccgacaaggcgttcaaacagaagctgcgggacgac
gggctgacggttcaaagcttctccggccaactgctgcatgagccatcgcggctgcagacg
aaatcgggcgggccttaccgcgtctatacgccattccggcgggcgctggaggggggcgaa
gagccccatgcgccggcggatgcgcccaagagcctcaaggcgccagaggtgtggccgaag
tccgagaaactcgccgactggaagctgctacccaccaagccggactgggcaaaggatttc
agtgatatctggacccccggcgagaacggtgcgaaggacaaactcgacgatttcatcgat
ggtgccctgaaaggttatgaagaaggccgggattttccggcaaaacccgcgacgtcgctg
ctttcatcgcatcttgccgcgggtgagatatcgccggcggccgtctggcacgccacgaaa
gggctttcgcgacatatcgcctccaacgatatcagccgtttccgcaaggaaatcgtctgg
cgggaattctgctaccatctgctgttccatttcccggagctggacgagaagaactggaac
gacagtttcgacgcatttccatggcgggatgatgagacgtccttcaaggcgtggacgcgc
ggcatgacgggttacccgatcgtcgatgccggcatgcgacaattgtggcaacatggcatc
atgcataaccgggtgcgcatgatcgtggcgtccttcctcatcaaacacctgctgatcgac
tggcggaagggcgagaagtggttccgcgacacgctcgttgacgccgatcccgcctccaac
gccgccaactggcaatgggtggcaggttcgggggcggatgcctcgccgttcttccgtatc
ttcaaccccatattgcagggagagaaattcgacggcgatggtgattatgtgcgccggttc
gtgcccgagcttgaaaagctcgagcggaaatacatccacaagccgttcgaagcgcccaaa
gatgtgctcaaaaaggcgggcgtcgaactcggcaagacctatccgctaccgatcgttgac
catggaaaagcgcgggaaagagcgcttgccgcctatgccgcagtgaagaagaccacataa
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