Agrobacterium sp. CGMCC 11546: GSF67_09470
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Entry
GSF67_09470 CDS
T10431
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
agrc Agrobacterium sp. CGMCC 11546
Pathway
agrc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSF67_09470 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrc03400
]
GSF67_09470 (uvrB)
DNA repair and recombination proteins [BR:
agrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSF67_09470 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GSF67_09470 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
UB2H
SWI2_SNF2
Microtub_bd
DUF2963
Motif
Other DBs
NCBI-ProteinID:
QKW97301
LinkDB
All DBs
Position
1:1801865..1804843
Genome browser
AA seq
992 aa
AA seq
DB search
MARSPKNLPSSRQGFEEAPQSSFEGAPLSGSVADWVKQLEAEAEAGSVETQREIASKAGK
HRKKIEIEARKEAEKAANKTAKNTTASKTARGVSIGASSDPKTRAAAGLNPVAGMDVSLE
EAANLAPGAVTATVEALSALIESGNPLFKDGKMWTPHRPARPPKSEGGVTIRMDSEYQPA
GDQPTAIADLVEGINSGERSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLY
SEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHSATRSLLERD
DCIIVASVSCIYGIGSVETYTAMTFQMQVGDRLDQRQLLADLVAQQYKRRDMDFQRGSFR
VRGDTIEIFPAHLEDAAWRISMFGDEIDSITEFDPLTGQKTGDLQSVKIYANSHYVTPRP
TLNGAIKSIKEELKVRLAELEKAGRLLEAQRLEQRTRYDIEMLEATGSCAGIENYSRYLT
GRNPGEPPPTLFEYIPDNALLFIDESHVSVSQIGGMYRGDFRRKATLAEYGFRLPSCMDN
RPLRFEEWDAMRPLTVAVSATPGSWEMEQSGGVFAEQVIRPTGLIDPPVEVRSARSQVDD
VLGEIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRL
GAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYA
DNITGSMKRAMEETSRRREKQMAYNAEHGITPESVKAKISDILDSVYERDHVRADISGGS
GKGFADGGHLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDEIKRLKAAELATMDDPM
AKEEAKSLEGGGKPRKSGTSARHESISPPEGEMSGRTEGGKPHPATSNSLFAKPSLDEMG
PGSDAGKPLFRRNSLDEMTVGRTEKPVRGAVPDKPGTEAGKRFSPLLEGQPERAADDPRP
LVRGKIGAGSYEDAGEQKRKSRTKGKTGRPGR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggccagatcaccgaaaaatctcccctcctcgcgtcagggcttcgaggaagccccgcaa
tcgtcattcgaaggcgcgccgctgagcggcagcgttgccgactgggtgaagcagctcgag
gcagaagccgaggcgggctcggtggaaacccagcgcgaaatcgcctcgaaagccggcaag
caccgcaagaagatcgagatcgaggcgcgcaaggaagcggaaaaagcggccaacaagacg
gctaaaaacactacggcttccaagacagcgcggggtgtttccataggcgcgtcgagcgat
ccgaaaacccgcgccgccgccggtctcaatccggtagctggcatggacgtctctctggag
gaggcggccaacctcgcaccgggtgccgtcaccgccaccgtcgaggcgctatcggcattg
atcgagagcggcaatccgctgttcaaggatggaaagatgtggacgccgcatcggccggcc
cgtccgcccaaatccgaaggcggcgttaccatccgcatggactcggagtaccagccggcc
ggcgaccagccgacggcgattgccgatctggtggaaggcatcaattccggcgagcgcagc
caggtgctgctcggcgtcaccggttcgggcaagaccttcaccatggccaaggtgatcgag
gcgacgcaacgcccggccgtcatccttgcgccgaacaagacgctggcggcgcagctttat
tccgaattcaaaaacttcttccccgacaatgcggtggaatatttcgtttcctattacgat
tattatcagccggaagcctatgtgccgcgctccgataccttcatcgagaaggaatcctcg
atcaacgagcagatcgaccggatgcgccactccgccacccgctcgctcttggaacgcgac
gactgcattatcgtcgcttcggtttcctgcatttacggtatcggttcggtggaaacctat
accgccatgaccttccagatgcaggtgggcgaccggctggaccagcgccagcttctcgcc
gatctggtggcccagcaatacaagcgccgcgacatggatttccagcgcggttcgttccgc
gtgcgcggcgataccatcgaaattttccccgcccaccttgaggatgccgcctggcgcatc
tcgatgttcggcgacgagatcgattccatcaccgaattcgacccgctgaccggccagaag
accggcgacctgcaatccgtcaagatctacgccaattcgcactatgtcacgccgcgcccg
acattgaacggtgcgatcaagtcgatcaaggaagaactgaaagttcgtctcgccgagctg
gaaaaggccggacgcctgctggaagctcaaaggctggagcagcgcacccgctacgatatc
gagatgctggaggccaccggctcctgcgccggcattgagaactattcgcgttatctcacc
ggccgcaatcccggcgaaccgccgccgacgttgttcgaatatatccctgacaacgccctc
ctcttcatcgatgaaagccacgtctcggtcagccagatcggcggcatgtatcgcggcgac
ttcaggcgcaaggcgacgctggccgaatacggcttccgcttgccttcctgcatggacaac
cgcccgctgcgcttcgaggaatgggatgcgatgcggccgctgaccgtcgcggtttcggcc
acccccggatcgtgggaaatggaacaatccggcggcgtcttcgccgaacaggtcatccgt
ccgaccggcctcatcgatccgccggtggaggtacgctccgcccgcagccaggtggacgat
gttctcggcgaaatccgcgaaaccgccgccaagggttatcgcacgctctgcaccgtgctg
accaagcgcatggcagaggacctgactgaatatctgcatgaacagggcgttcgcgtccgt
tatatgcactcggatatcgacacgctggaacgcatcgagatcatccgcgatctgcgcctt
ggcgccttcgacgtgcttgtcggcatcaaccttctgcgcgaaggcctcgatatacccgaa
tgcggtttcgtcgccatcctcgatgccgacaaggaaggcttcttgcgttcggaaacttcg
ctgatccagacgatcggccgcgccgcccgtaatgtcgacggcaaggtcatcctttatgcc
gacaacatcaccggctcgatgaagcgggcgatggaggaaacctcccgccgccgcgagaag
cagatggcctacaacgccgaacacggcatcacgccggaatcggtcaaggcgaagatttcc
gatattcttgattctgtttatgagcgcgaccacgtaagggccgatatttctggcggttcc
ggcaagggcttcgccgatggcggccatctggtcggcaacaatctacaggcccatctcaac
gcactggaaaaatccatgcgtgacgccgcagccgacctcgacttcgaaaaagccgcccgc
ctgcgcgacgagatcaaacgcctcaaggccgccgaactcgccaccatggacgaccccatg
gccaaggaagaggcaaaatcgctcgagggtggcggcaagccccggaaaagcggaacgagc
gcccgccacgagtcgatctccccccctgagggggagatgtccggcaggacagaggggggt
aagccacacccggcaacctccaactccctcttcgccaaaccctctctggacgaaatgggc
cccggctcggacgccggaaagccgcttttccgcagaaactcgctggacgaaatgacggtg
ggaagaaccgaaaagcccgtgcgcggcgcggtgcccgacaagcccggaacagaagccggc
aaacggttctcaccgctactggaaggccagcccgagcgtgccgccgatgatccgagaccg
ctggtccgcggcaagatcggtgcgggttcctacgaggatgccggggagcagaagcgcaaa
agccggacgaagggcaagaccgggcggccggggcgataa
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