Agrobacterium sp. CGMCC 11546: GSF67_09785
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Entry
GSF67_09785 CDS
T10431
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agrc Agrobacterium sp. CGMCC 11546
Pathway
agrc03420
Nucleotide excision repair
agrc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSF67_09785
03430 Mismatch repair
GSF67_09785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrc03400
]
GSF67_09785
Enzymes [BR:
agrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSF67_09785
DNA repair and recombination proteins [BR:
agrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSF67_09785
MMR (mismatch excision repair)
Other MMR factors
GSF67_09785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
Peptidase_M13
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QKW97357
LinkDB
All DBs
Position
1:1865557..1868031
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AA seq
824 aa
AA seq
DB search
MSNSFDDMPFFDEEPVAPRRATNNAPSENGGGLGIAARAMAARDQTRPAHDYLSGLNPEQ
REAVETLDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKERI
GVLVGGAVEGMPWLGTFHSIGVKLLRRHAELMGLKSDFTILDTDDVVRLIKQLIQAEGLD
DKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYTAYQNRLKTLNACDFGD
LLLHPISIFRRHTDILKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRAKDEPQNVCCVG
DDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGAAGHLIAHNEGRLGKT
LFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQRKNHKLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTIRN
LHDYARARDIPMLAAAADIIETDELKPKARKALFDVVQDFRRWQGLLENTEHTTLAEQIL
DESGYTAMWQADKTAEAPGRLENLKELIRSMESFESMRGFLEHVALVMDAEQNAELDAVS
IMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKKLCHIW
FVSNRRIHGLWQSTLPSRFLDELPPAHVDVAASDSNYGGYGGRGGYGQSRFDKADPFTNN
YSTPGWKRAQQNRSDATRDNWGTRSGHAVERIGYGESGPRTRTIDGELVAKSVADKPSKF
FVGDRVFHLKFGNGNISAIEGNKLTINFDRAGEKRVLDGFVEKV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagtttcgacgatatgccgttcttcgatgaagaacccgtggcaccgcgcagg
gcgaccaacaatgccccttcggaaaacggcggcgggcttggcattgccgcccgcgccatg
gcggcgcgcgaccagacgcggccggcacacgattatctttccggcctcaacccggaacag
cgcgaggccgtcgaaacgcttgacggaccggttctcgttctcgccggcgccggcaccggc
aagacccgcgttctgacgacccgcatcgcccatattctcgccaccggccgcgcctatcca
agccagatccttgccgtgaccttcaccaacaaggcggcccgcgagatgaaggaacgtatc
ggcgtcctcgtcggcggcgctgtcgagggcatgccgtggcttggcaccttccactccatc
ggcgtcaagcttctgcgccgccatgccgagctcatgggcctgaaatcggatttcaccatt
ctcgatacggatgacgtggtgcggctgatcaagcagctcattcaggccgaaggtcttgat
gacaagcgctggccggcaaaacagttcgccggcatgatcgacggctggaagaacaagggc
ctgacgccgccggatattcccgaaggagacagccgcgctttcgccaacggcaagggccgt
gaactttacaccgcctatcagaaccggctgaaaacgctgaacgcctgcgatttcggcgat
cttctgctgcacccgatcagcatcttccgccgccacacggatattctgaaagagtatcac
cagaagttccgttatattctggtggacgaatatcaggacaccaacacggcgcaatatatg
tggctgcggcttctcgcccagcgcgccaaggacgaaccgcaaaacgtctgctgcgtcggt
gacgacgaccagtcgatctatggctggcgcggcgcggaagtggacaatatcctgcgcttc
gacaaggattttcccggtgccaaggtcatcaagcttgagcgtaactaccgttccaccgaa
catattctcggcgctgccggccatctgatcgcccacaacgagggccgtctcggcaagacg
ctgtttaccgagcgcagcagtccggacgacgagaaggtcgtggtgcacgccgcctgggat
tccgaagaggaagcccgcgcggtcggcgaggaaatcgagcaactccagcgcaagaaccac
aagctgaacgacatggccatcctcgttcgcgcttccttccagatgcgcgaattcgaagac
cggttcgtgacgcttggcctcaattaccgcgtcatcggcggcccgcgcttttatgagcgc
ctcgaaatccgcgatgccatggcctatttccggctggtctgccaaccggccgacgatctc
gccttcgagcggatcgtcaatacgccaaagcgtggcctgggcgatacgacgatccgtaac
ctgcacgactatgcccgcgcccgcgatatcccgatgctggcagccgccgccgacatcatc
gagaccgacgagttgaagccgaaagcgcgcaaggcgctgttcgatgtggtgcaggatttc
cgccgctggcagggcctgctggaaaacaccgaacacaccacgcttgccgaacagattctc
gacgaaagcggctataccgccatgtggcaggccgacaagacggccgaagcaccgggacgg
cttgagaacctgaaggaactcatccgctcgatggaatccttcgaaagcatgcgtggattt
ctggaacacgtcgccctggttatggatgcggaacagaatgccgagctggatgccgtctcc
atcatgacgctgcattccgccaagggtctggaattcgacaccgtcttcctgcccggttgg
gaagaaggcctgtttccccaccagcgggcgctggacgaaggcggtcgctccggtctggag
gaagaacgtcgtctggcttatgtcggcatcacccgcgccaagaagctctgccatatctgg
ttcgtctcgaaccggcgcattcacgggctgtggcaatccaccctgccctcgcgtttcctc
gacgaactgccgcccgcccatgtggatgtcgcggcttccgacagcaattatggcggttat
ggcggacgcggcggttacggccagtcccgtttcgacaaggccgatcccttcaccaacaat
tactccacccccggctggaaacgcgcccagcagaaccgcagcgacgccacccgcgacaat
tggggcacacgctccggccatgcggtggagcgcatcggttacggcgaaagcggcccgcgc
acccgcaccatcgacggcgaactggtggcgaaatccgtggctgacaagccctcgaaattc
ttcgtcggcgaccgtgttttccacctcaaattcggcaatggcaatatttccgcgatcgaa
ggcaataaattgaccatcaacttcgaccgtgccggcgaaaagcgcgtgctggatggattt
gtggaaaaggtttga
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