Agrobacterium sp. CGMCC 11546: GSF67_11815
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Entry
GSF67_11815 CDS
T10431
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
agrc Agrobacterium sp. CGMCC 11546
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agrc03021
]
GSF67_11815 (rpoH)
Transcription machinery [BR:
agrc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GSF67_11815 (rpoH)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QKW97711
LinkDB
All DBs
Position
1:2280770..2281672
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AA seq
300 aa
AA seq
DB search
MARNSLPTITAGEAGLNRYLDEIRKFPMLEPQEEYMLGKRYAEHGDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVKEIATKLQVSEEEVISMNRRL
HGDASLNAPIKASEGESGQWQDWLVDDHESQEAVLIEQDELETRRRMLAKAMGVLNERER
RIFEARRLAEDPVTLEELSSEFDISRERVRQIEVRAFEKVQEAVQKEALEAARALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatagtttgcctacgatcacagccggcgaagccggtctcaatagatatctc
gacgaaattcgcaagttcccgatgctggagccgcaggaagagtacatgcttggcaagcgt
tacgccgagcatggcgaccgcgacgccgcgcacaagctcgtcacaagccacctgcgtctc
gtcgccaagattgccatgggttaccgcggttacggcctgccgatcggcgaagtcgtttcc
gaaggcaatgtcggcctgatgcaggcggtgaagaagttcgatccggaacgcggtttccgt
ctggccacctatgccatgtggtggatcaaggcttcgatccaggaatatatcctgcgctcg
tggtcgctagtgaagatgggcacaacggccaaccagaaacgcctgttcttcaacctgcgc
aggctgaaaggccgtatccaggcgattgacgacggcgatttgaagccggaacacgtcaag
gaaatcgccaccaagctgcaggtgtcggaagaagaagtcatctcgatgaaccgccgcttg
catggcgacgcctcgctgaatgcgccgatcaaggcatccgaaggcgagtccggccaatgg
caggactggctggtggatgaccatgagagccaggaagccgtgctgatcgagcaggacgag
ctggaaacccgccgccgcatgctggccaaggccatgggcgtgctgaatgagcgcgaacgc
cgcatcttcgaggcccgccgcctcgccgaagatccggtgacgctggaagaactctcatcc
gagttcgacatcagccgcgaacgcgtgcgccagatcgaggttcgcgccttcgagaaggtt
caggaagcggtgcagaaggaagcgctcgaagccgcccgcgcattgcgcgtggtggacgcg
taa
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