Agrobacterium sp. CGMCC 11546: GSF67_13490
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Entry
GSF67_13490 CDS
T10431
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
agrc Agrobacterium sp. CGMCC 11546
Pathway
agrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSF67_13490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrc03019
]
GSF67_13490
Messenger RNA biogenesis [BR:
agrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GSF67_13490
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QKW98009
LinkDB
All DBs
Position
1:complement(2653802..2654314)
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AA seq
170 aa
AA seq
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MTIKAEDLPYRPCAGIMVLNAQGLVWAGRRIKEGNSEYDGSPQLWQMPQGGIDDGERPLT
AAIRELYEETGMKTVTLLAEASDWIHYDLPPELIGIGLRGKYRGQAQRWFAFRFEGDESE
IQIDPPPTGHSAEFDAWDWKPMESLPELIVPFKRAVYEKVVAEFQHLSGK
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaaagcagaagatttgccttaccgtccctgtgcgggaataatggttttgaac
gctcagggcctcgtctgggccggccggcgcatcaaggagggcaactccgaatatgatggc
tcgccgcaattgtggcagatgccgcagggtggcatcgatgatggcgaacggcctttgacg
gctgccattcgtgaactctacgaagagacgggcatgaagactgtgaccctgcttgcggag
gcgagcgactggattcactatgatctgccgcccgaactgatcggtatcggcctcaggggc
aaatatcgcggccaggcgcagcgctggttcgcgttccgctttgagggtgatgaaagcgaa
atccagatcgatccgccgcccaccggacattcggccgaattcgacgcctgggactggaag
ccgatggaaagtcttccggaactgatcgtgcccttcaagcgggcggtctatgaaaaggtc
gtggcagagttccagcacctttccggcaaataa
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